KEGG   Marinobacter sp. NP-4(2019): EHN06_18985
Entry
EHN06_18985       CDS       T09527                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
manp  Marinobacter sp. NP-4(2019)
Brite
KEGG Orthology (KO) [BR:manp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:manp02044]
    EHN06_18985 (tssC)
Secretion system [BR:manp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   EHN06_18985 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: AZT85466
UniProt: A0A3Q9NKM6
LinkDB
Position
complement(4167109..4168590)
AA seq 493 aa
MSDTAVQQSAASESVAEGSLLDQVMANSRMAPADEGYDVARKGVATFIANLLKSDEKGQP
VNKALVDQMVVELDRKISAQMDEILHAPKLQELESSWRGLKLMVDRTEFRENIKVDILHA
TKAELLEDFEFAPDVTQAGFYKHIYSTEYGQFGGEPVGAVVGNYAFTPSTPDMKLLQYVS
SVGAMAHAPFLSSVAPSFFGVDSYQELPAIKELKAVFEGPKYAKWRSLRESEDARYLGLT
SPRFLLRVPYDPTENPVRSFNYKEDVSGDHEHYLWGNTAYLLATRLTESFAKYRWCPNII
GPQSGGAVEDLPVHLFESFGQLEAKIPTEVLITDRREYEMADEGFIALTMRKGSDNAAFF
SANSVQKPKQFPNTKEGKEAETNYKLGTQLPYMMIVNRLAHYIKVLQREQIGSWKERQDL
ERELNTWIRQYVADQENPPAEVRSRRPLRAAQVTVSDVEGDPGWYQVSLAVRPHFKYMGA
NFELSLVGRLDKD
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgtctgatactgctgtgcagcaatcggctgcctccgaatccgtagcagaagggtccttg
ctggatcaggtcatggccaacagccgtatggcgccggccgacgagggctacgatgtggcc
cgcaaaggagtggcgacgttcattgccaacctgctgaaaagcgatgagaaaggccagccg
gtcaacaaggcgctggtggaccagatggtggttgagctggatcgaaagatcagcgcccag
atggatgaaatcctgcacgcgccgaaactgcaggaactggaatcgtcctggcgcggcctg
aaactgatggtcgatcgcaccgaattccgcgagaacatcaaggtggacattctccatgcc
accaaagccgagctgctggaagatttcgaatttgccccggatgtcacccaggccggtttt
tacaaacacatatattccaccgagtacggccagttcggtggcgagccggtcggtgccgtg
gtcggcaactacgcgttcaccccgtccacaccggacatgaaactgctgcagtatgtgtcc
tccgtcggcgctatggcccatgcaccattcctgtcctcggtcgcgccgtcgttcttcggc
gtcgacagctaccaggaactgccggccatcaaggaactgaaggcggttttcgaagggcca
aaatacgccaaatggcgctccctgcgtgagtccgaagacgcccgctacctggggctgaca
tcgccgcgcttcctgttgcgggtaccctacgatcccaccgaaaacccggtgcgcagcttc
aactacaaggaagatgtgtccggcgaccacgagcattacctgtggggcaacaccgcctac
ctgttggccacgcgcctgaccgaaagcttcgccaagtatcgctggtgcccgaatatcatc
ggcccgcaaagtggcggcgcggtggaagacctgccggtgcacctgtttgaatccttcggc
cagttggaagccaagatacccaccgaagtgctgatcaccgaccgtcgcgaatacgaaatg
gccgacgaaggcttcatcgccctgaccatgcgcaagggcagcgacaatgcagcattcttc
tccgccaactcggtacagaagcccaaacagttccccaacaccaaggaaggcaaggaagcg
gaaaccaactacaagctgggtacgcaactgccttacatgatgatcgtcaaccgcctggcg
cactacatcaaagtgctgcagcgcgaacagatcggctcctggaaagagcgtcaggacctg
gagcgggaactgaacacctggatccgccaatacgtggccgaccaggaaaacccaccggcc
gaagtccgcagccgccgccccctgcgtgccgcgcaggtaaccgtctcggatgtggaaggc
gatccgggctggtaccaggtgtccctggcggtgcgtccgcacttcaagtacatgggcgcc
aacttcgaactgtcactggttggccgactggacaaggattaa

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