Marinagarivorans cellulosilyticus: MARGE09_P2618
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Entry
MARGE09_P2618 CDS
T07868
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
marq
Marinagarivorans cellulosilyticus
Brite
KEGG Orthology (KO) [BR:
marq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marq03032
]
MARGE09_P2618
03400 DNA repair and recombination proteins [BR:
marq03400
]
MARGE09_P2618
Enzymes [BR:
marq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MARGE09_P2618
DNA replication proteins [BR:
marq03032
]
Prokaryotic type
DNA Topoisomerases
MARGE09_P2618
DNA repair and recombination proteins [BR:
marq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MARGE09_P2618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Toprim_4
DUF2399
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
BCD98417
LinkDB
All DBs
Position
3402557..3405226
Genome browser
AA seq
889 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSQYVVKSSVGHIRDLPTSGSSAPVDPKARAAQAALTRK
MSPEEKAEYKARKSKEQLVKRMGIDPENHWQAHYEILPGKEKVVAELRKLAEDADEIYLA
TDLDREGEAIAWHLREAIGGDPERYRRVVFNEITKTAIQDAFKTPGKLDIDRVNAQQARR
FLDRVVGYMVSPLLWAKIARGLSAGRVQSVAVRLVTEREGEIRAFIPEEYWTLFAQLDTS
TGERLKCEVKRYKSEAFAPKTQEQTQLAVDALSNAKYEIIARDDKPTKSKPGAPYITSTL
QQAASTRLGFGVKKTMVLAQRLYEAGFITYMRTDSTNLSAEAVANCRDYIVDKFGDKYLP
ENPVSYSSKEGAQEAHEAIRPSEVTRLPTQLTGMERDAERLYTLIWQQFVACQMVPAEFT
STSVVVGAGDYQLRIKGRVVRFDGFMKVSPPVSKKEDDGILPDVKVGDVLTKHELLPNQH
FTKPPARFTEASLVKELEKQGIGRPSTYASIISTIQDRGYVHVQNRRFYADKMGDIVTDR
LVESFRELMDYSFTANMEAMLDTVAEGNKDWVELLNEFYADFTNQLTKASGDEFGMRNNA
PTETDITCEKCARHMQIRTGSTGVFLGCSGYALPPKERCKNTMNLVPGEEAVSMDADDDE
AETLQLRSKRRCPKCNTAMDNYLLDESRKLHICGNNPDCNGYEIEKGAFKIKGYEGPTLE
CDKCSAEMQLKNGRFGKYFGCMNEECKNTRKLLRNGEAAPPKMDPVDMPHLECLKVEDHY
VLRDGASGMFLAASQFPKNRETRAPLVKELLTVKDQLDPKYAHILKAPQEDSDGNDTVVR
YSRKTKEQYVQSEVDAKPTGWKAFYEGGKWVVQEKPVKKAPAKKAKKSD
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtctcttgttattgtggagtcacctgcgaaggcgaaaaccatcaataagtat
ctcggcagccagtatgttgtgaagtctagtgttggtcatattcgcgaccttcctactagt
ggctccagtgcaccggttgaccctaaagctagggcggctcaagctgccttgacgcgcaaa
atgtcgccagaagaaaaagccgaatacaaagctcgaaagtcgaaagagcagctcgttaag
cgcatgggtattgaccctgaaaatcactggcaagcgcattatgaaattttgccaggcaaa
gaaaaagttgtggctgagttgcgcaagctggctgaagatgccgacgaaatctatctcgca
acggatttggatcgcgagggagaagccattgcatggcacttgcgcgaggccattggtggt
gaccccgagcgttatcgccgagtggtttttaacgaaatcaccaaaacggcgatccaagat
gcatttaaaacaccgggtaagctggacatcgaccgcgttaatgcccagcaagcgcgtcga
ttcttagatcgcgttgtgggttatatggtctcgccgttgctgtgggccaagattgcacgc
ggtttgtcggcgggccgggtgcaatcggttgctgttcgtttggtgaccgagcgcgaaggt
gagattcgtgcatttatccccgaagaatactggacgttatttgcccagctcgatacatct
actggcgagcgcttaaaatgtgaagttaagcgttataagtcagaagcgtttgcccctaag
acgcaagagcaaacccaattagccgtcgatgccttaagcaatgctaagtacgaaatcatt
gctcgcgatgacaagccaacaaagtctaagccaggcgcaccttacattacctctacactg
caacaggccgcgagtacgcgcttgggctttggtgtaaagaaaacaatggtattggcgcag
cgcttgtacgaggcgggttttattacctacatgcgtacggactcaacaaacttaagtgcc
gaggctgtcgctaactgtcgcgattacatcgtggacaaatttggtgataagtatttgccg
gaaaatcctgtgagctattccagcaaagagggcgcacaagaggcgcacgaagcgattcgg
ccttcagaagtcactcgcctgccaacacagttaaccggcatggagcgcgacgcagagcgt
ttgtatactttgatttggcagcagtttgtcgcctgccaaatggtgcctgccgaatttacc
agtacatcggtggtggtcggtgccggcgattaccaattgcgtatcaaagggcgtgtggtt
cgatttgatggctttatgaaagtcagcccgcctgtaagcaaaaaagaagacgatggtatt
ttgccagatgtgaaggtcggcgatgtgctgaccaagcatgaactgctccccaatcagcat
ttcactaaaccgccggcgcgcttcaccgaagcgagcttggtaaaggagttagaaaagcaa
ggcattgggcgaccatcaacttatgcttcgattatttctaccatccaagatcgcggttat
gtgcatgtgcaaaaccgccgtttttacgccgataaaatgggcgatattgttaccgaccgt
ttggtagaaagttttcgcgagctgatggattacagctttacagccaacatggaggccatg
ctcgataccgttgctgaaggcaataaagattgggtggagctgctcaatgaattttacgct
gactttaccaaccaactgaccaaagcttcgggtgatgagtttggtatgcgcaacaatgcg
cccaccgaaaccgacattacttgtgaaaaatgtgcccgtcatatgcaaatacgcacgggc
agcacgggtgtgtttttgggctgctccggttacgcgttgccacctaaagagcgctgtaaa
aacaccatgaatctggtgcctggtgaagaggctgtcagtatggatgctgacgatgatgaa
gcggaaactctccagttgcgcagtaaacgccgttgtcctaagtgtaatactgcaatggat
aactacttgctggacgagtcgcgtaagctacacatttgcggtaataaccctgattgcaat
ggctacgaaatcgagaagggcgcctttaaaattaaagggtatgaggggccaactcttgag
tgcgataaatgcagtgctgaaatgcagcttaagaatggccgctttggtaagtactttggt
tgcatgaacgaagaatgcaaaaacacgcgtaaattgttgcgcaacggtgaagctgcgcca
cctaaaatggaccccgttgatatgccgcatttagagtgcctcaaagtggaggatcattac
gtattgcgtgatggcgcttcggggatgtttttggcggcgagccaattccctaaaaaccgc
gagacacgtgcgcctttagtgaaggaattactgacagttaaagatcagttagatcccaaa
tatgcgcacatcctaaaagctccgcaagaagatagcgatggcaacgatacggtagtgcgc
tatagccgaaagaccaaagagcaatatgtgcaatctgaggttgatgccaagcctacggga
tggaaggcgttttacgaaggcggcaaatgggttgttcaagaaaagcctgttaaaaaagcg
ccggccaaaaaagccaaaaagagcgactaa
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