Palleronia sp. THAF1: FIU81_08275
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Entry
FIU81_08275 CDS
T06247
Symbol
rpoH2
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maru03021
]
FIU81_08275 (rpoH2)
Transcription machinery [BR:
maru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FIU81_08275 (rpoH2)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QFU08668
UniProt:
A0A5P9JA82
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Position
complement(1616829..1617728)
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AA seq
299 aa
AA seq
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MATYANLPAPSPEQGLNRYMQEIRKFPMLEPDQEYMLAKRWVEHEDTDAAHQLVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKKFDPEKGFRLATYAMWWIRASIQEYVLRS
WSMVKLGTTSAQKKLFFNLRKAKARLGAMEEGDLRPENVKQIATDLGVTEAEVISMNRRM
AGSDASLNATISADGEGSAQWQDWLEDEGADQAGDYAERNELETRRALLTQAMDVLNDRE
KDILEQRRLKDQPVTLEELSGVYDVSRERIRQIEVRAFDKLQKRMTELAADKGMMEEEA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatacgcaaatcttccggcaccaagcccagagcagggcctgaaccgttatatg
caggaaattcgcaagtttccgatgctggagccggatcaggaatacatgctcgcaaagcgt
tgggtcgagcatgaggataccgatgccgcgcaccagcttgttacgtcacacctgcgcctc
gcggccaagatcgcgatgggatatcgcggttacggtcttccgcaggcagaggtgatttcc
gaggccaacgttggcctgatgcaggcggtcaagaagttcgaccccgaaaagggcttccgg
ctggcgacctacgcgatgtggtggatccgcgcgagtattcaggaatacgtcctgcggtct
tggtccatggtcaaactgggcacgaccagcgcgcagaagaaattgttcttcaacttgcgc
aaagcgaaggctcgtctaggcgcgatggaagagggcgacttgcgccccgaaaacgtcaag
cagatcgccaccgatctgggcgtgaccgaggctgaagtgatctcgatgaaccgtcgcatg
gcgggttcggacgcatcgctaaacgcgacgatttcggccgatggtgaagggtccgcgcag
tggcaagactggctagaggatgagggcgccgaccaggccggtgactacgccgagcgcaac
gagcttgagacgcgccgcgccctgctcacgcaggcgatggatgttctgaacgaccgtgag
aaggatatcctagagcagcgccgtctgaaggatcagccggtcacgctagaggagctgtcg
ggcgtctacgacgtcagtcgcgagcgcattcgtcagatcgaggtgcgcgcgttcgacaag
ctccaaaagcgcatgaccgaactcgcagccgacaagggtatgatggaagaagaggcgtag
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