Mycolicibacterium arabiense: MARA_28860
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Entry
MARA_28860 CDS
T07049
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
marz
Mycolicibacterium arabiense
Pathway
marz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MARA_28860 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marz03400
]
MARA_28860 (recB)
Enzymes [BR:
marz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MARA_28860 (recB)
DNA repair and recombination proteins [BR:
marz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MARA_28860 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BBY49418
UniProt:
A0A7I7RXQ1
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All DBs
Position
2549301..2552648
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AA seq
1115 aa
AA seq
DB search
MKPFDLCGALPPENATTVLEASAGTGKTFALAGLVTRYVAEGVATLDQMLLITFGRAATQ
ELRDRVRRQMADAAAAFDDPSLIGDNLLVAHLVNGTTEERTERRQRLRDALASFDSATIA
TTHQFCQLVLRSLGVAGDSDTAVTLVESLTDLVTEVVDDLYLAHFGQEREDPALTYADAL
SLAREVVRNPATELRPLDPEPGSRAETCIRFATDVLTEMEIRKRRMAILGYDDLLTRLAN
ALDAPDSPARTRMHQRWPIVMVDEFQDTDLVQWQVIDRAFSGRSTLILIGDPKQAIYAFR
GGDIVTYLSAAQSAGAQMTLATNWRSDAALVDRLQAVLKGAQLGDPRIVVHEIEAAHRGT
RLAGAPFPDPFRVRVVQRTTFGKRGTQNVPIDDIRRHIGRDLANDVATLLASGATFGGRR
IEARDVAVIVEKHKDARICQNALAAAGIPCVYTGDSDIFESSAAEDWLALLEAFDQPHRP
GVVRAAAATVFFGHTAESLVAGGDELTDELSETLREWAGHARERGVAAIFEAAQLRGMAD
RVLSWPDGERHMTDLAHVTEMLQDVAHRERYTLPALRDWLRAERDERGDGRTERNRRLDS
DVAAVQIMTVWVSKGLQYPIVYLPFAFNRWVPEDENVLYHEGDVRCLYVGGKDGPDYHAV
AKQGRAENAGDDSRLTYVALTRAQAQVVAWWAPARDEPTGGLSRILRGRAPGEAAVPDVC
VPSKTNDDDAWARLQAWADAGGPVLEQSVLTPAPKAPVPQRPTDLGARHFHRGIDTSWRR
TSYSGLIRVTETSNVSSEPEVAELDDEASAEIPLALPPAGPSMPSPMADLPTGARFGTLV
HSVLETADPMATDLGAELAVRIREHLVWWPVDVPPDDLAAALVPMHDTPLGPLANDLTLR
EIGLPDRLRELDFEFPLAGGDLRADAPDVRLRDVGRLLTEHLPADDPMASYAGRLTSEPL
AGQTLRGYLSGQIDAVLRVPNTLPGSLRSCPPDPEHTGHRYVVVDYKTNWLGDGDEPLTA
ADYDRPRLIEAMLHSDYPLQALLYSVVLHRFLRWRQRGYEPERHLGGILYLYVRGMCGPE
TPVVDGHRAGVFDWQPPAALIVAMSDLLDTGRAVA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccttcgacctgtgcggagcgttgccgcccgagaacgccaccaccgtgctggag
gccagcgcgggcactggcaagacgttcgcgctggcgggtctggtcacccgctacgtcgcc
gagggcgtcgcgacgctcgaccagatgctgctcatcacattcggtcgggccgcgacccag
gagctgcgcgatcgggtacgtcgccagatggctgatgccgcagcggcattcgacgacccg
tcgctgatcggtgacaacctgctcgtcgcccacctggtgaacggcaccaccgaggagcgc
actgagcgccggcagcggctgcgggatgcgctggcctcgttcgactccgcgacgatcgcg
accacccaccagttctgccagctggtgctgcgctcgctcggcgtggccggcgactccgac
accgcggtgacgctggtggagagcctcaccgacctggtgaccgaggtcgtcgacgacctc
tacctggcgcacttcggacaggagcgcgaggatccggcgctcacgtacgccgacgcgctg
agcctggcgcgcgaggtagtgcgcaacccggcgacggagcttcggccgctggatcccgag
ccgggctcgcgtgccgagacctgcatccggttcgccacggacgtgctgacggagatggag
atccgcaagcggcgcatggccatcctcggctacgacgacctgctgacccggctggcgaac
gcactcgatgcgcccgactcccccgcccgcacccggatgcaccagcgctggccgatcgtc
atggtcgacgagttccaggacactgacctcgtgcagtggcaggtgattgaccgggcattc
agcggacgatcgacgctgatcctgatcggcgacccgaagcaggccatctacgcgttccgc
ggtggcgacatcgtcacctacctcagcgcggcgcagagcgcgggcgctcagatgacgctg
gcgaccaactggcgcagcgacgccgcactcgtcgaccggttgcaggccgtcctgaaaggc
gcccagctcggcgacccgcgcatcgtcgtgcacgagatcgaggccgcccatcggggcacc
cggctggccggtgcgccgtttcccgacccgttccgcgtccgcgtcgtgcagcgaacgacg
tttggcaagaggggaactcagaacgttcccatcgacgacatccgcaggcacatcggtcgc
gacctggccaacgacgttgccactctgctcgcgagcggggccacgttcggcggccgccgg
atcgaggcgcgcgacgtcgcggtcatcgtcgagaagcacaaggacgcgcggatctgtcag
aacgcgttggcggccgcgggcattccgtgcgtctacaccggcgactccgacatcttcgag
tcctccgcggccgaggactggctcgcactgctggaggcgttcgaccagccgcaccggcct
ggtgtcgtgcgggccgcggccgcgaccgtcttcttcggccacaccgccgaatcgctggtc
gccggtggcgacgagttgaccgatgagctgtcggagacgttgcgcgagtgggccggtcac
gcccgcgagcgcggggtcgcggccatcttcgaggcggcgcagctgcgcgggatggccgac
cgcgtgctgtcctggcccgacggcgagcggcacatgaccgacctcgcgcacgtgaccgag
atgctgcaggacgtcgcccaccgcgagcgctacaccctgcccgcgcttcgggactggctg
cgcgccgaacgcgacgagcgcggtgacggtcgcaccgaacgcaatcgcaggctcgacagt
gacgtggccgcggtgcagatcatgaccgtctgggtcagcaagggcctgcagtacccgatc
gtgtacctgccgttcgcgttcaaccggtgggtgcccgaggacgagaacgtcctgtaccac
gagggcgacgtgcggtgcctgtacgtcggcggcaaggacgggcccgactaccacgccgtc
gccaagcagggtcgcgccgagaacgccggggacgacagcagattgacctacgtcgcgctg
acccgggcgcaggcgcaggtggtggcatggtgggcgccggcgcgcgacgaacccaccggc
gggctgtcccgcatcctgcggggccgtgcccccggcgaggcggcggtgcccgacgtctgc
gtccccagcaagaccaacgacgacgacgcctgggcgcgcctgcaggcgtgggccgatgcg
ggcggacccgtcctcgagcagtcggtgctgactcccgcgccgaaggcaccggtgccgcag
cggcccaccgatctcggcgccaggcacttccaccgcggcatcgacacgtcgtggcggcgc
acgtcgtactccgggctcattcgagtcaccgagacctcgaacgtcagtagcgagcccgag
gtcgcggagttggacgacgaggcgtccgccgagatcccgttggccctgccgcccgccggg
ccctcgatgccgtcgccgatggccgacctgccgacgggcgcgaggttcggcaccctggtg
cactcggtgctggagaccgccgatccgatggcgactgatctcggcgccgaactcgcggtt
cggatccgcgagcacctggtgtggtggccggtcgacgtgccacccgatgacctggccgct
gctctggtaccgatgcacgacactccgctgggaccgctggcgaacgatctgacgctgcgc
gagatcggactgccggacaggttgcgcgagttggacttcgagtttccgctcgccggcggc
gatctgcgcgcggacgcgcccgacgtccggctgcgcgacgtggggcggctgctcaccgag
cacctgccggccgacgacccgatggcgtcctacgccgggcggctgaccagcgagccgctg
gccggccagaccctgcgcgggtacctgagcggtcagatcgacgccgtactgcgcgtgccc
aacacacttcccgggtcgcttcgctcctgcccgccggatcccgaacacaccgggcaccgc
tacgtcgtcgtcgactacaagaccaactggctcggcgacggtgacgaaccgctgaccgcc
gccgactacgaccgaccgcgcttgatcgaagcaatgctgcactccgactatccgctgcag
gcgctgttgtacagcgttgtgctgcatcggttcctgcgatggcggcagcgcggctacgaa
ccggagcggcacctcggcggcatcctctacctgtacgtccgtgggatgtgcggcccggag
acgccggtggtcgacggtcaccgggccggggtgttcgactggcagccgcccgccgcgctg
atcgtggcgatgtcggatctgctcgacacggggagggcggtggcatga
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