KEGG   Massilia sp. YMA4: DPH57_04690
Entry
DPH57_04690       CDS       T05528                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
masy  Massilia sp. YMA4
Pathway
masy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:masy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DPH57_04690 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:masy02044]
    DPH57_04690 (icmF)
Secretion system [BR:masy02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DPH57_04690 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical PilJ
Other DBs
NCBI-ProteinID: AXA90531
UniProt: A0A7U5XW87
LinkDB
Position
1056636..1060133
AA seq 1165 aa
MKKLFRWLIKPPVLALLGVLLLALVIWFEAPLVSFDGHAPFAPERVRWYWIAALLVLWAL
WFGGKLLVVKLANLRLLESLAAQQKAAPDQPKAEVAAELAQLNQRMREALAVLRKSRTGG
RGGLYQLPWYMIIGAPGTGKTTALTRSGLKFPLAGSMGPGAIGGIGGTRNCEWWFTDEAV
LLDTAGRYTTQDSDAPADHAAWTGFLQLLRRHRRRRPINGVILALSLTDVLRRDEAGRAA
HVAALRARLKELHEQLGLRFPVYVLVTKCDLLAGFVEFFDHLSREERGQVWGMTFPTDGS
LAAFPAEFDLLEQRLQARVLARMQQERDPERRALVYRFPQQFAAMREALGTMLNEVFEPN
RYEQQALLRGVYFSSGTQEGTPLDRVMSALAASFGVGCQALAPHGAAGAAQPEGRSYFLT
RVLRDVMFPEAQLAGVNRTVERRRQWLQWGGLGAAALLFLLTAAAMLRSYLRNDAYVREM
ASRGADLARRVAAGGPALPVLDAARTLPGGYAEREQAPPWSMRFGLYQGDKLGEAARIAY
RRLLQEMLLPRVQQRMEERLRRGNAGDMDALYETLRVYLMLGDPGHFDSASIAGWLAWDN
PRAQADLGEPGLRALSAHQEALLETLREGQVLPQLDQDLVGASRLALAQMSLEQRVYASL
KRRVMASGLPEFSAVSAGGPTAASVLTRRSGAPLTRGVNGMFTLAGHARFVEASQAALAN
VAAERWVLARQEAATGDEAGMRQAMLQLYYDDYIKAWDALLADVTVRPFDTLEQGARMAN
LLGGADSPLRKFLMATSRETTLTAAAKPAAAGAGAGVAAKLGDYTKRLQGLLGNEAPAAA
APTEHPVDAHFAALHQLTAGTPPPLDAALQTLKDVAVYLDAAAAAKRSGTPPPPADALAR
VRLEADGKPEPLAAVLKTIDSGGAGLASGGERERLNTLWRAGPATFCRQAVAGRYPIVRS
ATADIPAEDFGKLFAPGGLIDDFFQKNLAQYVDMGGSQWRWRPTASNGNLGISQAALDEF
QRAARIRDAWFGAGGRLASLRFTLRPLSLDPALSKLTLDIDGQPLVVAPGALAAGTFQLP
SGKGSGQVQLEAVPVSSHSTLRREGPWAWLRMLDAASVEQTGQSERYKVTFDVNGRRAVF
EMTASSVVNPFRRGVLEQFRCVDSL
NT seq 3498 nt   +upstreamnt  +downstreamnt
atgaaaaagctgtttcgctggctgatcaagccacctgtgctggcgctgctgggcgtgttg
ttgctcgcgctggtgatctggttcgaggcaccgctggtgtcgttcgacggccatgcgccg
ttcgcgcccgaacgggtgcgctggtactggatcgccgcgctgctggtactgtgggcgctc
tggttcggcggcaagctgctggtcgtcaagctggccaacctgcgcctgctggaaagcctc
gctgcgcagcagaaggcggcgccggaccagccgaaggcggaagtggcggccgagctggcc
cagctcaaccagaggatgcgcgaggcgctggccgtgctgcgcaagtcgcgcacgggcgga
cggggcggcttgtaccagctgccgtggtacatgatcatcggtgccccgggcaccggcaag
accacggcgctgacgcgttccggactgaagttcccgctggccggcagcatgggcccgggc
gccatcggcggcatcggcggcacgcgcaactgcgagtggtggtttaccgacgaagccgtg
ctgctggacacggccggccgctacacgacgcaggacagcgatgcgccagccgaccacgcc
gcctggaccggcttcctgcagctgctgcggcgtcatcgccggcggcgtccgatcaacggc
gtgatcctggcgctgtcgctgacggacgtgctgcgccgcgacgaggccggccgggccgca
cacgtcgcggcgctgcgggcccgcctgaaggagctgcacgagcaactgggcctgcgcttt
cccgtctacgtgctggtcacgaagtgcgacctgctggccggcttcgtcgaattcttcgat
cacctgagccgggaagagcgcggccaggtgtggggcatgacgttcccgaccgacggctcc
ctggccgccttcccggccgaattcgacctgctcgagcagcgcctgcaggcacgggtactg
gcgcgcatgcagcaggagcgcgatccggagcggcgcgcgctggtctaccgttttccccag
cagttcgccgccatgcgcgaggccttggggacgatgctgaacgaggtcttcgaacccaac
cgctacgagcagcaggcgctgttgcgcggggtgtacttcagcagcggcacgcaggagggc
acgccgctggaccgcgtgatgagcgcgctggcagcgtcgttcggcgtcggctgccaggcg
ctggcgccgcacggcgcggccggcgcggcccagccggaagggcgcagctacttcctgacg
cgggtgctgcgcgacgtgatgttcccggaggcgcagctggccggcgtcaaccgcaccgtg
gagcgccggcgccagtggttgcaatggggcggcctgggcgcggcggcgctgctcttcctg
ctgacggccgccgccatgctgcgcagctacctgcgcaacgacgcgtatgtgcgcgagatg
gcgagccgcggcgccgacctggcccggcgcgtcgcggccggcgggccggcgctgccggta
ctggatgcggcgcgcacgctgccgggcggttacgccgagcgcgagcaagcgccgccgtgg
tcgatgcgcttcggcctgtaccagggcgacaagctgggcgaagcggcccgcatcgcctac
cggcggctgctgcaggaaatgctgctgccgcgcgtgcagcaaagaatggaagagcgcctg
cggcgcggcaacgcgggcgatatggacgcgctgtacgaaacgctgcgcgtctacctgatg
ctgggcgatcccggccacttcgactcggcctcgatcgcgggctggctggcctgggacaac
ccacgggcccaggccgacctgggcgagccgggcctgcgtgcgctgtccgcgcaccaggaa
gcgttgcttgaaacgctgcgcgaaggccaggtgctgccgcaactggaccaggacctggtc
ggcgcgagccgcctggcgctggcgcagatgtcgcttgagcagcgcgtctacgccagcctg
aagcgccgcgtgatggccagcgggctgccggaattttccgccgtcagcgcgggtggcccg
acggcggcatccgtgctgacgcggcgcagcggcgccccgctgacgcgcggcgtcaacggc
atgttcacgctggcgggccatgcccgcttcgtggaggccagccaggccgcgctggccaac
gtggcggcggaacgctgggtgctggcgcggcaggaggccgccaccggcgacgaagccggc
atgcgccaggccatgctgcagctgtattacgacgactacatcaaggcgtgggacgcgttg
ctggcggacgtgacggtgcggccgttcgacacgctggagcagggcgcgcgcatggccaac
ttgctgggtggcgccgactcgccgctgcgcaagttcctgatggccacgagccgcgagacc
acgctgacggctgccgccaagccggccgccgcgggcgccggggccggcgtcgcggccaag
ctgggcgactacaccaagcgcctgcaaggcttgctgggcaacgaagcgccggcggcggcc
gcgccgacggagcatcctgtcgacgcgcacttcgcggccctgcaccagcttacggccggc
acaccgccaccactggatgcggcgctgcagacactgaaggacgtggccgtctacctggac
gcggcggccgcggccaagcgcagcggcacgccgccaccgccggccgatgcgctggcgcgg
gtgcggctggaagcggacggcaagcccgagccgctggcggccgtgctgaagacgatcgac
agcggcggcgccggcctggcctccggcggcgagcgtgagcgcctgaacacgctgtggcgc
gccggccccgccacgttctgccgccaggccgtcgcgggccgctacccgatcgtgcgcagt
gccactgccgacatcccggccgaggacttcggcaagttgttcgccccgggcggcctgatc
gacgatttcttccagaagaatttggcgcagtacgtggacatgggcggcagccagtggcgc
tggcggcccacggccagcaacggcaacctcggcatttcgcaagcagcacttgacgaattc
cagcgcgccgcccgcatccgcgacgcctggttcggtgccggcgggcggctggcgtcgctg
cgcttcacactgcgtccgctgtcgctcgatccggcgctcagcaagctgacgttggacatc
gacggccagccgctggtcgtcgcgccgggcgcgctggcggctggcacctttcagctgccg
agcgggaagggcagtgggcaggtgcagttggaggctgttccggtcagctcgcacagcacg
ctgcggcgggaggggccttgggcgtggttgcggatgctggatgcggctagcgtcgagcag
actgggcagagcgagcggtacaaggtgacgttcgatgtgaatgggcggagggccgtgttt
gagatgactgccagtagtgtggtcaatccgtttcggcgtggggtgttggagcagtttcgg
tgtgtggatagcttatga

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