Massilia sp. YMA4: DPH57_21300
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Entry
DPH57_21300 CDS
T05528
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
masy
Massilia sp. YMA4
Pathway
masy03030
DNA replication
masy03430
Mismatch repair
masy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DPH57_21300
03430 Mismatch repair
DPH57_21300
03440 Homologous recombination
DPH57_21300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masy03032
]
DPH57_21300
03400 DNA repair and recombination proteins [BR:
masy03400
]
DPH57_21300
03029 Mitochondrial biogenesis [BR:
masy03029
]
DPH57_21300
DNA replication proteins [BR:
masy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DPH57_21300
DNA repair and recombination proteins [BR:
masy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
DPH57_21300
TLS (translesion DNA synthesis) factors
Other SOS response factors
DPH57_21300
Mitochondrial biogenesis [BR:
masy03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
DPH57_21300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
DUF5342
RhlB
Motif
Other DBs
NCBI-ProteinID:
AXA93462
UniProt:
A0A7U5Y1U3
LinkDB
All DBs
Position
4948973..4949479
Genome browser
AA seq
168 aa
AA seq
DB search
MASVNKVIIVGNLGRDPEIRYMPSGDAIANIAVATSFRSKDKNTGEQKETTEWHRISFFG
RLAEIVGQYLKKGSSVYVEGRLQTRKYTDKDGVEKYATDIIAQEMQMLGGRQGMGGGDGM
GMGGGDDMGGYDAPPSRPAPRPQQSAPAPRPAPKPAPNFSDMDDDIPF
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtcaacaaagtcatcatcgtcggcaacctgggccgcgatccggagatccgc
tacatgccgagcggcgatgccatcgccaatattgccgttgccacgtcgttccgcagcaag
gacaagaacacgggcgagcagaaggaaaccaccgagtggcaccgcatctcgttcttcggc
cgcctggccgagatcgtcggccagtacctgaagaagggctcgtcggtctacgtcgaaggc
cgcctgcaaacgcgcaagtacacggacaaggacggcgtcgagaagtacgccaccgacatc
atcgcgcaggaaatgcagatgctgggcggccgccagggcatgggcggcggggatggcatg
ggcatgggtggtggggacgacatgggtggctacgacgcgcctcctagccgtccggcacct
cgtccgcagcagtcggctccggcgccacgcccggcacctaagccggcgccgaatttctcg
gatatggatgacgatattccgttttaa
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