Mycobacterium avium subsp. paratuberculosis E1: RC58_00710
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Entry
RC58_00710 CDS
T03787
Name
(GenBank) RNA polymerase factor sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mavi03021
]
RC58_00710
Transcription machinery [BR:
mavi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RC58_00710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
SnoaL_4
HTH_23
Sigma70_ECF
NTF2
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
AJK73707
UniProt:
A0A7U4U4K3
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Position
188904..189929
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AA seq
341 aa
AA seq
DB search
MRVSLLAQTPEGDSVVGADFTAHAEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAY
DRFEGKSSVRTWLHRIATNTCLSALEGRQRRPLPVGLGAPSADPTAELVERREVPWLEPL
PALTDDPADPSVIVGSRESVRLAFVAALQYLSPRQRAVLLLRDVLGWRAAEVAEAIGTTT
AAVNSLLQRARAQLDAVGPSADDQLAQPDSAETQDLLARYIAAFESYDIDRLVELFTAEA
IWEMPPYTGWYQGARTIVTLIHQQCPAEGAGDMRLLPLIANGQPAAAMYMRAGDVHLPFQ
LHVLDVRGDRVSHVVAFLDDSLFAKFGLPAALGPRQEGVRA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgagcctgctcgcgcaaacccctgaaggtgactcggtggtgggcgccgatttc
accgcgcacgccgaaccgtaccggcgtgaactgctggcccactgctatcggatgacggga
tccctgcacgatgccgaggatctggtgcaggagacgctgctgcgggcctggaaggcctac
gaccgcttcgagggcaagtcctcggtgcggacctggctgcatcgcatcgccaccaacacc
tgcctgagcgcgttggaaggccggcagcgccggccgctcccggtgggactgggcgccccc
agcgcggaccccaccgccgagctggtcgagcgtcgcgaggtgccctggctggaaccgctg
ccggcgctgaccgacgacccggccgacccgtcggtgatcgtcggctcgcgcgaatcggtg
cggttggcgttcgtggccgcgctgcaatacctttcgccgcggcaacgggcggtgttgctg
ctgcgcgacgtgctgggctggcgcgccgccgaggtcgccgaggcgatcggcaccaccacg
gccgccgtcaacagcctgctgcaacgcgcccgcgcccagctggacgccgtcgggcccagc
gccgatgaccaactggcgcagcccgattcggccgagacccaagacctgttggcgcgctac
atcgccgcgttcgaaagctacgacatcgaccgcctggtcgagttgttcaccgcggaggcg
atctgggaaatgccgccgtacaccgggtggtatcagggcgcgcggaccatcgtcaccctg
atccatcagcaatgcccggccgagggcgccggcgacatgcgcctgctgccgctgatcgcc
aacggccaaccggcggcggccatgtacatgcgggccggcgacgtccatctgcccttccag
ctgcacgtgctggatgtgcgcggggaccgggtttcgcatgtggtggccttcctcgacgac
agcctgttcgccaagttcgggctgcccgccgcgctgggtccccggcaggaaggtgtgcgc
gcatga
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