Mycobacterium avium subsp. paratuberculosis E1: RC58_04470
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Entry
RC58_04470 CDS
T03787
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mavi03016
]
RC58_04470 (truB)
Enzymes [BR:
mavi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RC58_04470 (truB)
Transfer RNA biogenesis [BR:
mavi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RC58_04470 (truB)
Prokaryotic type
RC58_04470 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AJK74366
UniProt:
A0A7L5MG22
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All DBs
Position
972856..973737
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AA seq
293 aa
AA seq
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MSPPGLVVVDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVLGVERATKILGL
LTAAAKSYSATIRLGQATSTDDAEGDVARSVDARHLTSQAIEAAVGGLRGDIHQVPSTVS
AIKVAGKRAYKLVREGQAVELPARPVRIDRFEVRGLRAAGACVDVDVEVDCSSGTYVRAL
ARDLGAALGVGGHLTALRRTRVGRFGLEQAYGLDELAECPRLSYSLDEACLLIFGRRDLS
ADEAEAAGNGRALAAAGIDGVYAACAPDGRVIALLRDEGARTKSVVVLRPATL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagccctccgggcctggtcgtcgtcgacaagccggcgggaatgaccagtcacgacgtg
gtgggccggtgtcgccggatcttcgcgacccgacgggtggggcacgccgggacgctcgac
ccgatggccaccggcgtgctggtgctcggcgtcgagcgcgccaccaagatcctcggcctg
ctgaccgcggccgccaagtcgtactcggccaccatccggctgggccaggccacctccacc
gacgacgccgagggcgacgtggcgcgcagcgtcgacgcgcggcacctgacgagccaggcg
atcgaggcggcggtgggcgggctgcgcggcgacatccaccaggtgccctcgaccgtcagc
gcgatcaaggtggccggcaagcgggcctacaagctggtccgcgagggccaggccgtcgag
ctgccggcccgcccggtgcgcatcgaccggttcgaggtgcgcggcctgcgcgccgccggt
gcgtgcgtggacgtcgacgtcgaggtggactgctcgtcgggaacctacgttcgggcgctg
gcccgcgacctgggcgcggcgctgggggtgggcgggcatctgacggcgctgcggcgcacc
cgggtcgggcgcttcgggctcgagcaggcgtatgggctcgacgagctggccgagtgcccc
cggctgagctacagcctggacgaggcctgcctgctcatcttcgggcgccgcgatttgtcc
gccgacgaggccgaggccgccggcaacggccgggccctggcggcggccgggatcgacgga
gtgtatgccgcctgcgcccccgacggccgggtgatcgcgctgctgcgcgacgagggcgcg
cggaccaagtccgtggtggttttgcgcccggcgacgctttag
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