Mycobacterium tuberculosis variant bovis BCG ATCC 35743: BCGT_3982
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Entry
BCGT_3982 CDS
T03796
Name
(GenBank) Putative RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mbx
Mycobacterium tuberculosis variant bovis BCG ATCC 35743
Brite
KEGG Orthology (KO) [BR:
mbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbx03021
]
BCGT_3982
Transcription machinery [BR:
mbx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BCGT_3982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
SnoaL_4
NTF2
Acetyltransf_6
SnoaL_3
Motif
Other DBs
NCBI-ProteinID:
AHM09900
LinkDB
All DBs
Position
complement(4262568..4263566)
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AA seq
332 aa
AA seq
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MSVLAENSGREPADERRGDFSAHTEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAY
EGFAGKSSLRTWLHRIATNTCLTALEGRRRRPLPTGLGRPSADPSGELVERREVSWLEPL
PDVTDDPADPSTIVGNRESVRLAFVAALQHLSPRQRAVLLLRDVLQWKSAEVADAIGTST
VAVNSLLQRARSQLQTVRPSAADRLSAPDSPEAQDLLARYIAAFEAYDIDRLVELFTAEA
IWEMPPYTGWYQGAQAIVTLIHQQCPAYSPGDMRLISLIANGQPAAAMYMRAGDVHLPFQ
LHVLDMAADRVSHVVAFLDTTLFPKFGLPDSL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtgctcgcagaaaactctggccgcgagcccgccgacgaacggcgcggggacttc
tccgcccacaccgagccctaccggcgtgaactgctcgcacactgctatcgcatgactggc
tcgctgcacgacgcggaagaccttgttcaggagacgctgctgcgggcctggaaggcctat
gagggcttcgcgggcaagtcctcgctacgcacctggctgcatcggatcgccaccaacacc
tgcctgacggcgttggagggccgtcgacgccggccgttgccgacggggctcgggcggccg
agtgccgatccgtccggggagttggtggaacgtcgagaggtgtcctggctggagccgctg
ccggacgtgacggacgaccctgctgatccctcaacgatcgtcgggaaccgggaatcggtg
cggttggcctttgtggcggctctgcagcacctctcaccccggcagcgagccgtactgctg
ctgcgcgacgtgctgcagtggaaatcggccgaggtggccgacgcgatcggtaccagcacc
gtcgccgtcaatagcctgctgcagcgggcccgctctcagctgcagacggtccggcccagc
gccgccgaccggttgtccgcgccggattcacccgaggcgcaagacctgttggcccgctat
atcgccgcgttcgaggcttatgacatcgaccggttggtcgagctgttcaccgccgaggcg
atctgggaaatgccgccgtataccggctggtaccagggcgcacaggccatcgtcaccctc
attcaccaacagtgccccgcctattcgcctggcgatatgcgcctgatttcgttgatcgcc
aacggccagcccgccgcggccatgtacatgcgtgccggtgacgtgcacctgccttttcag
ctacacgtgctggacatggccgccgaccgcgtgtcacacgtggtggccttcctcgacacc
accttgttcccgaaattcggcctgcccgattcgctgtga
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