Methylacidiphilum caldifontis: IT6_09320
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Entry
IT6_09320 CDS
T09436
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
mcao
Methylacidiphilum caldifontis
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
IT6_09320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcao03400
]
IT6_09320
DNA repair and recombination proteins [BR:
mcao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
IT6_09320
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Parvo_NS1
DUF4978
Motif
Other DBs
NCBI-ProteinID:
QSR88551
LinkDB
All DBs
Position
complement(2004185..2005033)
Genome browser
AA seq
282 aa
AA seq
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MKALWKGTISFGLVTIPVKLYPAVKTEPLRFKFLRKSDLSPITNKRIAVADNKEVPWDQV
VRGYEYEKGKFVILKDEDFDRVDMEAIHTVRVLDFVVLAEIDPVYFEKPYYLVPDKGGEK
AYQLLHYGLVKTGKTAIAKIVLHNKEHLAALKPKNSFLTLELMYFQREIVDPKELPAPPK
AELDEREKKITVELIEKMSVPWDPNRYQDEYSKAIEKIIKEKIKKGTKGIPKETKLRKGA
AKEQKDLISLLEESLRMGNGRTQISTASILKKERKTRKKKTQ
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccctgtggaaggggaccattagttttggccttgtcactatcccagtaaaactt
tatccagccgtaaaaaccgaacctttacgattcaagtttctccgtaagagtgatctttct
cccatcacaaacaaacggatagcggttgcggataacaaagaagtcccctgggatcaagta
gttcgtggatatgaatatgaaaaagggaaatttgtaattcttaaagatgaagactttgat
cgggtcgatatggaagccattcatacagtcagagtcctagattttgttgtactggctgaa
atcgatccggtttacttcgaaaaaccttattatttagtccccgataaaggcggagaaaaa
gcctaccaactgctgcattacgggttagttaaaactggcaagaccgccattgccaagatt
gtattgcacaacaaggagcatttagctgcattaaaacctaaaaattcatttctgacactt
gagctcatgtattttcaaagggaaatcgttgatccaaaggaactgcctgccccaccaaaa
gctgagttggatgaacgcgagaaaaaaataacggtcgaattgattgaaaaaatgtctgta
ccttgggatccaaaccgctatcaagacgaatactcgaaagccattgaaaaaatcatcaaa
gaaaaaataaagaaaggaactaaaggaattcctaaagaaacaaaacttcggaaaggagcg
gctaaagaacaaaaagaccttatttctttgctcgaagaaagtttaagaatgggaaacggc
aggacccaaatctcaaccgctagcatactaaaaaaggagcgtaaaacaagaaagaaaaaa
acccaatga
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