Momordica charantia (bitter melon): 111015673
Help
Entry
111015673 CDS
T05045
Name
(RefSeq) probable RNA-dependent RNA polymerase 1
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcha03036
]
111015673
Enzymes [BR:
mcha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
111015673
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
111015673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
UvrB_inter
Motif
Other DBs
NCBI-GeneID:
111015673
NCBI-ProteinID:
XP_022146462
UniProt:
A0A6J1CZM7
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA
GHVVSQAAAEERLWYGSSYLKAREADRQNRRGGVGVERMENLTLHLGSQISKEKLSVIWK
GENCSVEFGSGVRKLFVYVNLEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAPRIFK
KSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQLPSF
FKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQHGYLPGP
LLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQLPWKPDI
SLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKIRSID
LSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASREGLSA
ADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNVTYCFSD
GIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYKSL
DTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSRALEVL
ELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL
DETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKALHHMV
DCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQLDHDVTI
EEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPKTGVPAN
LPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAAKCYDPD
MEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKRTDMEQI
SHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYNEGME
RDHFLSFPWCVSDKLIQIKKKKICQENSSPI
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggggaagacgatcgagatttacggattccggcgggacgtcaccgcggaggaagtgaag
gaattcctggagaatcacacgggagacggaaccgtatcggcggtgaggatcgcggaattc
agagacgaaaattcccggttcacattcgcgacggtccagttctcgagcgagttggcggcg
gggcacgtggtgtctcaggcggctgcggaggagcggctctggtacggcagctcgtacctg
aaggccagggaagcggatcggcagaacaggcgcggcggcgtgggcgtggagagaatggag
aatttgacgcttcacttggggagccagatttcgaaggagaaattgagcgtgatttggaaa
ggggaaaattgtagcgtggaatttgggagtggagtgagaaaattgtttgtgtacgtgaat
ttggagtacaagatggaggtgtggttcgagagtattttgagagttcagcttcgttgccca
cccgacggagcttccaagtttcttctcattcagttgcagcgcgctccacggattttcaag
aaaagctcgtcttcttcttcttcatcttcatcttcatcttcttctcgattctatttcaag
gaatctcaatctagtggttcccgttggattagggatgtcgatttcactccatcttcttgc
attggacaatcatttgctctgtgcttggagctttctcccggagatcagcttccttctttc
ttcaaaacattggttggatacgaagaaatttatggccccttcaatttggagacaggttct
tctttctcttccacttcaaatctggttcctattgttactccaccccaaggctttgatttc
tcttttaagattttgttcaaaatcaatgcgctggttcaacacggttatcttcctggacca
ttactggacgatgaattcttccgactggtcgatcccagtcggtttcgtcctgaatacatc
gaacgtgccctagaaaaactatttaatttgaaggaatgtttctacgaaccccaaaaatgg
ctcaagcagcaatatctgtcatactacaactctaagcagcttccatggaagcctgatatc
tctttggatgatggcctggtctatgtgcacagggttcaaatcacaccttctaaggtctac
ttccgtggtccggaggcgaatctttccaaccgggtagtacgtcagtactctgatgatatt
gataattttattagggtatcttttgttgatgaggagttggataaaatccgttccatagat
ctgtcgccgcgtacatctactgcaaatggtgaaagaactagagtttatgatagaatatta
tctactttaaggaatggtatcgtcattggtgacaagaaattcgagtttcttgctttctcg
gcaagtcaactacgggaaaattctgtttggatgtttgcttcgagggaggggcttagtgca
gcagatattagagagtggatgggtgattttcgtcagataagaaatgtggccaaatatgct
gctcgacttggacaatcttttggctcatctagaaaaactttgtgtgttgaagaacatgaa
attgaagtcattactgatgtagaagttgaaacaaataacgtcacatattgtttctctgac
ggcataggaaaaatatctgaaacattggctgagaaggttgctgaaagatgtggcttgatc
aatcatacaccatctgccttccagatccgatatgctggatacaaaggcgttgttgctatt
gatccaacatcggaaaagaaattgtcactaagaaagagtatgttgaagtataagtcactt
gacacccaactagatgttttagcatggagcaagtatctgccctgttttcttaatcgtcag
gtgatcaaccttttgtccaccctcggaattaaggaccgtgtttttgagaagaaacaaaag
gaggctatatatcaactgaattgtattttaaaagacccatcaagggcattagaggttttg
gagttgatgtccccaggggagatgaccagcgttctgaaggaaatgcttttgtattacaaa
ccaaacaaagagccttttcttaatatgatgctacgaacatttcgggcagataaattgtta
gacttgaggaccaaatcaaggatatttgttcccaagggaaggaccatgatgggctgccta
gatgaaaccgggactctaaaatatggtcaggtgtttgtgcaatgctctgtccctggtaga
tcaagtgaaagcaatttcattcctgagggaaaagtagtcgtcgctaaaaacccctgttta
cacccaggggacatgcgtgtactcaatgctgttgatgtgaaagctttgcatcatatggtg
gattgtgttgtttttccgcagaaaggacagagacctcatccaaatgaatgttctgggagt
gatttggatggtgatttgtactttgtttgctgggatccggagctgaattgtattcgaccc
gttaaacctatgagctacaagcctgcaccaactatccagttggatcatgatgtcacaatt
gaggaagtgcaagaatatatggccaactacatggtcaatgacggtcttggagccattgca
aatgcacacactgtctttgcagatagggaacctaggaaggcaatgagtgctaaatgtatc
aaactcgcaaaactgttctcaattgccgttgacttcccgaagactggtgtaccagcaaac
ttaccaccctttcttcgtgtccacgagtttccagatttcatggagaagctcgatagaccc
gcctacgaatcaaagggtgtcatcgggaagctttttcgcagtgtgaaagatgtttctttc
aacaccaacaccattgaaacctacactagggaagttgctgctaaatgctatgatccagac
atggaaatagatgggtttgaaaagtatttgaatgaagcttttgatttcaaaaccagatat
gattacaagttggggaacctgatggattattatggtattaggactgaaccagaattagtc
agcggaaatatcttaagagtgggaaagtctttcgataaaaggaccgacatggaacaaatt
agccatgccatgaggtcacttagaaaggaagccagggcttggttcaacgagaagggaagc
aagcctagatgtgacgatgatgacaacggggacgaggacgaggaattcgcaaaagcatca
gcgtggtatcatgtcacatatcatcaaagctattggggtcgctataacgaaggcatggaa
agagatcactttctgagtttcccatggtgtgtttctgataagctaattcagattaaaaag
aagaagatttgccaggaaaattcttctccaatttaa
DBGET
integrated database retrieval system
