Methanothrix soehngenii: MCON_2891
Help
Entry
MCON_2891 CDS
T01468
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mcj
Methanothrix soehngenii
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcj03019
]
MCON_2891
03009 Ribosome biogenesis [BR:
mcj03009
]
MCON_2891
04131 Membrane trafficking [BR:
mcj04131
]
MCON_2891
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcj04147
]
MCON_2891
Messenger RNA biogenesis [BR:
mcj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MCON_2891
Ribosome biogenesis [BR:
mcj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MCON_2891
Membrane trafficking [BR:
mcj04131
]
SNARE
SNARE associated proteins
Others
MCON_2891
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MCON_2891
Exosome [BR:
mcj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MCON_2891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_14
TIP49
AAA_22
AAA_33
AAA_5
AAA_2
AAA_3
AAA_28
AAA_18
nSTAND3
Mg_chelatase
AAA_7
AAA_17
ABC_tran
DUF5906
Sigma54_activat
DUF815
TsaE
Zeta_toxin
IstB_IS21
SLFN-g3_helicase
Viral_helicase1
AAA_11
Zot
Ribosomal_L7Ae
Motif
Other DBs
NCBI-ProteinID:
AEB69255
UniProt:
F4C0R7
LinkDB
All DBs
Position
2458063..2460240
Genome browser
AA seq
725 aa
AA seq
DB search
MKPAEDASVLLRVAEAYHKDAGKGVARINPIILAQLGVENGGVVEINARDKVYAIAWPGT
PEDPQDIIRIDGNTRSNLGTGIDNRVNVRRATARPARKIVVAPTRQIRLMGGQQYLLRML
QGRAVVKGEMLRVEMINSSLNLAVVSTVPNGPVLVTQETIISITRETLDELALHVRDISY
EDIGGLSREIREIREMIEVPLRHPELFSRLGINPPRGVLLHGPPGTGKTLIARAVAGETD
ANFISISGPEIVSKFYGESEQRLRQIFDEASKAAPSIIFIDEIDSIAPKREEVSGDLERR
VVAQILSLMDGLSSRGEVIVIAATNRPNALDPAIRRGGRFDREIEIGIPNRNGRLEVLYV
HTRGMPLDESLDLMEIADSTHGFVGADLYALCKEAAMRTLERALPDLDVKEDIPLDVLDN
LNVTREDFLSALKKIEPSAMREVFVEVAQVHWDEVGGLDEAKRSLVEAVEWPLMYPEAFA
SVGVRPPRGILLYGLPGTGKTLLVRALATESNVNFISVKGPELLSKWVGESERAVREIFR
KARQAAPALVFFDEIDSIVPARGSGSDSHVTERVVSQFLTEMDGLMELKDVVIVAATNRP
DLLDSSLLRPGRFDRLVYIPMPDKEARQKILEIYLSKMPAYEVSAQWLADITENFSGADL
EMLCREAGMLALREHIRPGMKREELIVDKILVTEKRFQEASEYIRPHLSKDMLQGYTKMI
REFQV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgcagaggatgcatcagttttgcttcgagtggctgaagcatatcataaggat
gcggggaagggagtggccaggatcaatcccatcattctcgcccaattgggagtggagaac
ggcggggtagtggagatcaatgcccgggataaggtctatgccatcgcatggcctggaact
cctgaggacccccaggatataatcaggatcgacggaaacacccggtccaacctggggacg
ggaatagacaatcgggtgaatgtccgccgggccacggccaggcccgccagaaagatcgtg
gtcgcccccacccgccagatccgcctcatgggaggacagcagtatctcttgcgcatgctc
caggggagggcagtggttaagggtgagatgctgcgggtggagatgataaacagcagcctc
aacctggcagtggtgagcaccgtgccaaacgggccggttctggtaactcaggagacgatc
atcagcatcaccagagagaccctggatgagctggccctgcatgtgcgggacatatcctat
gaggacatcggcggcctgtcccgggagatcagggagatcagagagatgatcgaggttccg
ctgcgccatccagagctcttcagccggctgggaatcaatcctccccggggggtgctcctg
catggtcctccgggaacgggaaagacgctcatcgccagagcggtggcaggcgagaccgac
gccaacttcatctccatctccgggccggagatcgtatccaagttctatggcgagagcgag
cagcggctgcgccagatattcgatgaagcgtcgaaggcggctccttccatcatattcatc
gatgagatcgattccatcgctcccaagagggaagaggtctcgggcgacctggagcggcgg
gtggttgcccagatcctttccctgatggacggcctctcctccaggggagaggtgatagtg
atagcggccaccaaccggcccaatgccctcgatcctgccattcgcagggggggccgattc
gaccgggagattgagataggcataccaaacagaaacggcaggctggaggtgctctatgtc
cacaccaggggcatgcccttggatgaatcgctggacttgatggagatcgcagactcgact
catggcttcgtaggagcggacctttatgccctgtgcaaagaggcggccatgcgcaccctg
gaaagggctctgcccgacctggacgttaaagaggacataccattggatgtgctggacaat
ctcaatgtgaccagagaggatttcctgtccgccctgaagaagatcgagccatcggcgatg
agagaggtcttcgtcgaggtggcccaggtccattgggatgaagtgggcggcctggatgag
gccaagcggtccctggtcgaggcggtggaatggccgttgatgtacccagaggccttcgcc
tcggtgggtgtccggccgccgcggggtattctgctctacggtcttcccggtacgggcaag
accctcctggtcagagctctggccacggagagcaatgtcaacttcatcagcgttaaggga
cctgagctattgagcaaatgggtgggcgagtcggagagggcagtcagagagatctttcgc
aaagcccgccaggctgctcccgccctggtattcttcgacgagatcgattccattgttccc
gcccggggcagcggatcggactcgcatgttaccgaaagagtggtcagccagttcctgacg
gagatggatggactcatggagctgaaggatgtggtgatagtggcggccaccaaccggccg
gaccttttggatagctcgttgctccggccgggcaggttcgatcgtttagtttatattccc
atgccggataaagaagctcgtcagaagatactggagatctatctctcaaagatgcccgcc
tatgaggtctctgctcaatggctggcggatatcactgagaacttcagcggtgccgatctg
gagatgctctgccgggaggcggggatgctcgctttgcgggagcatatccggccgggaatg
aaaagagaagagctgatagttgacaagatccttgttacagagaagcgtttccaggaggcc
agcgagtatatcaggccgcatctgtcaaaagatatgctgcagggatacaccaagatgatc
cgtgaattccaggtatga
DBGET
integrated database retrieval system
