Mycoplasmopsis californica HAZ160_1: MCAL160_0656
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Entry
MCAL160_0656 CDS
T03651
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mcm
Mycoplasmopsis californica HAZ160_1
Brite
KEGG Orthology (KO) [BR:
mcm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MCAL160_0656 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcm03021
]
MCAL160_0656 (rpoD)
Transcription machinery [BR:
mcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MCAL160_0656 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BAP01128
LinkDB
All DBs
Position
complement(495253..496743)
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AA seq
496 aa
AA seq
DB search
MAKKEYESVIKLISKYAKSNNIESLSQAQVYEYLDEIKVEIPDDSMDEVLAELHQRGLIL
DDTDLGDDDFSDVEDFMVEINENGDYDNSDNTDEEQVFKKSRSNEEEEEYDELESAIDLG
DYDDDYSSEYSFSDDYEYSDDSSYAEDDEDEIIEKKEVKEVKKESKRKSAKSITDDDLEI
ENYDDEEIDLSKDSDDVNPHKLINKLSETNDIVKWYMRWIGKYGKLLNKEEEEKLAFEME
KGGFRGKRARDKLIKHNLRLVINNAKKYKNRGLSFIDLISEGNAGLLKASQKFNVSKGFK
FSTYATWWIRQAITRAVADQARTIRVPVHMVETINKIAKIERELHQENGTEPTDEEVASR
FGQGFDAEKVRNIRRINIDPISLDKQIGKENDSSFSDFVKDESVVNPTDYASQEELVDIL
NEILRESLDSDERRLICKRFGVGYDENGEKYNITPLEELARERNVSKERIRQIENKILRK
LKNCTKKGKHLKDFFR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaagaatatgaatcagtgataaaactaatttcgaaatacgctaaaagcaac
aacatcgaatctctatcgcaagcacaagtttatgaatatttagacgagattaaggtggaa
ataccagatgattcaatggatgaggttcttgcagaacttcatcaaagaggtttgattctt
gatgatacagacctgggggatgatgattttagtgatgtcgaagatttcatggtagaaatt
aatgaaaatggagactatgacaactcggataatactgacgaagaacaagttttcaaaaaa
tctcgttcaaatgaagaggaagaagagtacgacgaattagaaagcgccattgatttaggt
gattatgatgatgattattcatcagaatattcatttagcgatgattatgaatattcagac
gattcaagttacgcagaagatgacgaagatgaaataatagagaaaaaagaagtaaaagaa
gtcaaaaaagaatcgaaacgcaaatctgccaagtcaattaccgatgatgatttagagatt
gaaaattatgacgatgaggaaattgatttaagcaaagattctgatgatgtcaaccctcat
aaattaatcaacaaactaagcgaaaccaacgatattgttaagtgatacatgcgttgaatt
ggtaagtatggaaaattattaaataaagaagaagaagaaaaactagctttcgaaatggaa
aaaggaggctttagaggcaaaagggctcgtgataagttaattaaacataatttacgttta
gttataaataatgctaaaaaatacaaaaatcgcggattaagctttattgatttgatttct
gaaggtaatgccggtttattaaaagcatcgcaaaaattcaatgtaagtaaaggatttaag
ttttctacctatgctacctgatgaatccgtcaagcaattacgcgtgctgttgctgaccaa
gcacgcaccattcgtgttcctgttcacatggttgaaacaataaataagatagctaagatt
gagcgcgaattacaccaagaaaacgggacagaaccaacagatgaagaagtagcaagtcgt
tttggccaaggctttgatgccgaaaaagttcgtaatatccgtcgcatcaacattgatcct
atttctttggataaacaaatcggaaaagaaaacgactcttcattttctgactttgtcaaa
gatgaaagtgtggtgaatccaactgattatgcatcgcaggaagaattagttgatattttg
aatgaaattttacgtgaatcattagactctgacgaacgaagacttatttgcaagcgattt
ggcgtcggttatgatgaaaacggagaaaaatacaacatcacaccgcttgaagaattagcc
cgtgagcgtaatgtttcaaaagagcgtattcgccaaattgaaaacaaaattttacgcaag
ttaaaaaactgcaccaaaaaaggaaaacatctaaaggatttttttagataa
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