Mycobacterium cookii: MCOO_06380
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Entry
MCOO_06380 CDS
T07035
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mcoo
Mycobacterium cookii
Pathway
mcoo03030
DNA replication
mcoo03410
Base excision repair
mcoo03420
Nucleotide excision repair
mcoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCOO_06380 (polA)
03410 Base excision repair
MCOO_06380 (polA)
03420 Nucleotide excision repair
MCOO_06380 (polA)
03440 Homologous recombination
MCOO_06380 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcoo03032
]
MCOO_06380 (polA)
03400 DNA repair and recombination proteins [BR:
mcoo03400
]
MCOO_06380 (polA)
Enzymes [BR:
mcoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MCOO_06380 (polA)
DNA replication proteins [BR:
mcoo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MCOO_06380 (polA)
DNA repair and recombination proteins [BR:
mcoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MCOO_06380 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCOO_06380 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HTH_23
HHH_2
DNA_pol_lambd_f
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BBX44623
UniProt:
A0A7I7KRQ1
LinkDB
All DBs
Position
662428..665091
Genome browser
AA seq
887 aa
AA seq
DB search
MLLDGNSLAYRAFYALPAENFKTQGGLTTNAVYGFTAMLINLLRDESPTHIAAAFDVSRQ
TFRAERYPEYKANRTTTPDEFRGQIDVTKEVLAALGITVLAEPGFEADDLIATLATQADK
EGYRVLVVTGDRDSLQLVNDDVTVLYPRKGVSELTRFTPDAVAEKYGLTPEQYPDFAALR
GDPSDNLPGIPGVGEKTATKWISEYGSLQALVDGVDSVRGKVGDALRANLAGVIRNRELT
ELVRDVPLAQTPDTLRMQPWNRDQIHQLFDQLEFRVLRDRLFDTLAAVEPEVDEGFDVRG
GALEPGTVGQWLADHVADGRRAGLAVVGTHLPYGGDATALAIAAADGDGAFIDTTTLTPE
DDAALASWLADPEQPKALHEAKLAIHDLTGRGWMLDGISSDTALAAYLVRPGQRSFTLDD
LSLRYLRRELRAETSEQQQLSLLDDDEGVDEQAVQTTVLRARAVVDLADALDAELTRIDS
TSLLGEMELPVQRVLANMESAGIAVNLDQLTELQSQFADQIRDAAEAAYAVIGKQINLGS
PKQLQVVLFDELEMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLKVTVD
GLLNSVAGDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRQIRDAFVVGSGYTELM
TADYSQIEMRIMAHLSRDDGLIEAFNTGEDLHSFVAARAFGVPIDEVTGELRRRVKAMSY
GLAYGLSAYGLAAQLKISTEEAKVQMDAYFARFGGVRDYLLDVVEQARKDGYTSTVLGRR
RYLPELDSTNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKALTASGLSSRMVLQVHD
ELLFEVASGERAQLEELVRDKMGGAYPLDVPLEVSVGYGPSWDTAAH
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggacggcaattcgctggcgtaccgcgcgttttatgcgctgccggcggagaac
ttcaagacgcagggtggtctgaccaccaacgcggtgtacggcttcaccgccatgctgatc
aacctgctgcgcgacgagtcgccgacccacatcgcggcggccttcgacgtgtcgcggcag
acattccgcgccgagcgttatccggagtacaaagccaaccggacaaccaccccggacgaa
ttccgcggtcagatcgacgtcaccaaggaagtgcttgcggcactgggcattacggtgctt
gccgagccgggcttcgaagccgacgacctgatcgcgacgttggccacccaggccgacaaa
gagggctaccgggtgctggtggtcaccggcgaccgtgattcgctgcagctggtcaacgac
gacgtgaccgtgctgtatccgcgcaaaggtgtcagcgaactgacccgattcactccggac
gccgtcgcggagaagtacggcctgacacccgagcagtaccccgacttcgccgcgctgcgc
ggcgacccgagtgacaacttgcccggtatccccggcgtcggcgagaagacggctacgaag
tggattagcgagtacggctcgctgcaggcgctggtcgacggtgtcgactcggtgcgaggc
aaggtcggtgacgcgctgcgggccaaccttgccggggtgatccgcaaccgtgagctcacc
gagctggtccgtgacgtgcccttggcgcagacgccggacacgctgcggatgcagccgtgg
aatcgtgaccagattcaccagctgttcgaccagctggagttccgagtcctgcgtgatcgc
ctgttcgacaccctcgccgccgtcgagcccgaggtcgacgagggcttcgacgtccgcggg
ggagcgctggagcccggcacggtcgggcagtggctggccgaccacgtcgccgacgggcgc
cgcgcagggctggcggtggtcgggacgcatctgccctacggcggcgatgcgaccgcgctg
gcgatcgccgcggccgacggcgacggcgccttcatcgacaccaccacgttgacgcccgaa
gacgatgcggcgctggcgtcgtggctggccgatcccgagcagcccaaggcgctgcacgag
gcgaagctggccatccacgacctcaccgggcgcggctggatgctggacgggatcagctcc
gacaccgcgctggccgcttacctggtccgccccgggcaacgcagcttcaccctcgacgat
ttgtcgctgcgttacctgcgtcgcgagctacgcgcggaaacatctgagcagcaacaactt
tcgcttctcgacgacgatgaaggcgtcgacgagcaagccgtgcagaccacggtgttgcgg
gcccgtgcggtcgtagacctggccgacgccttggacgccgagctgacccgcatcgactcc
acgtcgctgttgggcgagatggagctaccggtgcagcgggtgctcgcaaacatggagtcc
gcgggcatcgcggtcaacctggaccaattgaccgaactgcaaagccaattcgccgatcag
atccgtgatgcggccgaggcggcgtacgccgtcatcggcaagcagatcaacctcggctcg
cccaaacagttgcaggttgtgctgttcgacgaactcgagatgccgaaaacgaagcggacg
aagacgggctacaccaccgacgcggatgcgctgcaatcactgttcgacaaaaccggtcac
ccgttcctgcagcatctgctcgcacaccgcgacgtcacccggctgaaggtgaccgtcgac
gggctgctgaattcggttgccggcgatggccgtatccacaccacgttcaaccagaccatc
gccgcgaccggccggctgtcgtccaccgagcccaacctgcagaacatcccgattcgcacc
gacgccggccgacagatccgcgacgccttcgtcgtgggcagcggctacaccgagctgatg
accgccgactacagccagatcgagatgcggatcatggcgcatctgtctcgcgacgacggc
ctcatcgaggccttcaacaccggcgaagacctgcactcgttcgtcgccgcgcgagccttc
ggcgtcccgatcgacgaggtgaccggcgagctgcggcgccgggtcaaggcgatgtcctac
gggctggcctacgggctgagcgcctatgggctggcggctcagctgaaaatctccaccgaa
gaggccaaggtccagatggatgcctacttcgcccggttcggcggagtgcgcgattacctg
ctggacgtcgtcgagcaggcccgcaaagacggctacacctcgacggtgctgggccgccgc
cgctacctgcccgagctggacagtacgaaccggcaggtgcgcgaggccgccgagcgcgcg
gcgctcaacgcgccgatccagggcagcgcggccgacatcatcaaggtggcgatgatcgag
gtcgacaaggctctgacggcgtcggggttgtcgtcgcggatggtgttacaggtgcacgac
gagctgttgttcgaggtcgcgtccggcgagcgtgcgcaactcgaggagttggtgcgcgac
aagatgggcggcgcgtacccgctcgacgttccgctggaggtctcggtgggctacggcccg
agctgggacaccgccgcgcactga
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integrated database retrieval system
