Moraxella cuniculi: NCTC10297_01405
Help
Entry
NCTC10297_01405 CDS
T06646
Symbol
mfd
Name
(GenBank) Transcription-repair-coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mcun
Moraxella cuniculi
Pathway
mcun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10297_01405 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcun03400
]
NCTC10297_01405 (mfd)
Enzymes [BR:
mcun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10297_01405 (mfd)
DNA repair and recombination proteins [BR:
mcun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
NCTC10297_01405 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
MFD_D3
ERCC3_RAD25_C
SNF2-rel_dom
UB2H
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
VEG13440
UniProt:
A0A448GXB2
LinkDB
All DBs
Position
1:1513139..1516720
Genome browser
AA seq
1193 aa
AA seq
DB search
MMQNLTADLPTKPAHKTTLPLLGGADLSFWLSHLGKQRLTVMITKDQHELNQLETELAFF
GITAKVFSDWEILAYDQLSVHQDISSERIALLTQMPTTGILLVSIQTLMQRIAPAAWLIG
RHFDLQVGERFDIDKQKQRLSKAGYIHTDNVFEPGEFAVRGSIVDIFAIGQSLPFRLDLF
DDEIESIKFFDPQTQRTIDDNKLAELKKQSWENSEIANWQLPKTASVERMRLLPAREFPL
IEGRELFRQNFASIFETVSARKVELFNDVMAGIAAQGVEYYAPLFFDIDQWLSTGSLFSY
LPQDTLIVSHANTAEQHERFWQQIQSRYHARAHDKQLPILPPDYLFLPNNEFHQALKSYA
RIVIDTSQQAAIEQADYAQSSQPKLGDMQIVPPPTLLINHQAAEPLVELLDFIKTNQAAT
LIVAESAGRREIILELLKGKIDTELVDNYQDFINKKDRFYTNKVAISVSVIERGLWLQGD
DSICIISETQIFGRQVLQARRRRQSSVSQDFLVKSVTELTEGALVVHLEHGIGRYQGLVV
LDVGEGEQEFIHLKYADDANIYVPITNLALIGRYSGTDSQAVALSKIGSGKWEKSKQKTL
EQIYDVAAELLNTQARRNARSGISFDIDMAQYELFVSGFAFEETPDQTEAIQAVIHDMKQ
SKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLSRFADWPI
KIESLSRFGNKKHHEKVIKGLAEGVVDIVIGTHKLIQDDVKFKRLGLMIIDEEHRFGVRH
KERIKALQSNIDSLSMTATPIPRTLNMALSGMQDISIIATPPARRLPIKTFLLPKSDSTI
VDAILREILRGGQVYYLHNDVASIEAAADSLRELVGQARVAVAHGQMNETELSMVMSDFY
HKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLLVPS
LKGLSADAKKRLDAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDM
LERATKAIKQGKTPSLATPLDLISEIDIHASALIPESYLADVHERLLFYKKISSLDDIAA
LIAVRTEMIDRFGALPVATQNLFAVHRIRIRSKALGIAKIDATDRVITILFRPDTLVDGL
AIIKLIQSGDGYRMLGETTIRHQSPSVMDTQARLDKIHELLLYFEANTVRLAS
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatctcaccgctgatttgcccacaaagcctgcccataagaccactttgcct
ttattgggtggtgctgatttgagtttttggctgtctcatcttggcaagcagcggctaacc
gtgatgattaccaaagatcagcatgagctaaatcagctagaaacagaattggcatttttt
ggcatcactgccaaagtttttagcgattgggagattttggcatacgatcagttatccgtg
catcaagacatcagctccgagcggattgcactgctgacccaaatgccaacaacgggtatt
ttgttggtgagtatacagacgctgatgcaacgaattgcaccagctgcttggctaattggc
aggcattttgatttgcaagttggcgagcgatttgatattgacaagcaaaaacaacggcta
agtaaggcaggttatatccacacggataatgtctttgaacccggtgaatttgctgtgcgt
ggcagcattgttgatatctttgcgattgggcaaagtttgccgtttcgccttgatttattt
gatgatgaaattgaatccatcaagttttttgatccgcaaacacagcgaaccattgatgat
aataaattagcagaactaaaaaaacaatcttgggaaaatagcgaaattgccaactggcaa
ctgcccaagactgcaagcgttgagcgaatgcgtctgttgcctgcacgagaatttccgcta
atcgaagggcgtgaattatttcgtcagaattttgccagtatctttgagacggtcagtgcc
agaaaggttgaactgtttaatgatgtaatggctggcattgcagcacagggggtggaatat
tatgcaccgctgttttttgatattgatcaatggctaagcacgggcagtttgttctcttat
ttgccacaagatacgctgattgtcagccatgccaatacggcagagcaacatgagcgtttt
tggcaacaaatccaatctcgctatcatgcacgagctcatgataaacagctgccaattttg
ccacctgattatttatttttgccaaataatgaatttcatcaagcattaaaatcttatgca
cgcattgtcattgatacatcgcaacaagctgccatagagcaagccgactacgcacaaagt
agccaaccaaaacttggcgatatgcagattgtgccgccaccaactttgcttatcaatcat
caggcggcagagccacttgtagaactgcttgactttattaagaccaatcaggcagccaca
ttgattgttgccgaaagtgctggtcgccgtgagattattttagaattactaaaaggtaaa
atcgataccgaactggttgataattatcaagattttattaataaaaaagatagattttat
acaaataaagttgccatcagcgtttctgtcattgagcgaggtttgtggttgcaaggtgat
gatagcatctgcatcattagtgagacgcaaatttttggtcggcaggtattgcaggcacgc
cgtcgtcgccaatccagtgtttcgcaagattttttggtcaaatcagtaaccgagctgacc
gaaggtgctttggtggtgcatttggagcatggcatcggtcgttatcaggggctggtagtg
cttgatgttggcgagggtgagcaagaatttattcatctaaaatacgccgatgatgccaat
atttatgtgccaattaccaatttggcgttgattgggcgttatagcggtacagattcgcaa
gcggttgctttgtcaaaaattggctcgggtaaatgggagaaatccaaacaaaaaacctta
gagcagatttatgatgttgccgctgagctgttaaacacccaagccagacgcaatgccaga
tctggtatcagttttgacattgacatggctcaatacgagctgtttgtcagtggttttgcc
tttgaagaaacgccagatcaaaccgaagcgatacaggcggtaattcatgatatgaagcaa
tccaaaccaatggataggcttatttgtggtgatgttggctttggtaagacagaggtggca
atgcgtgcggcgtttattgccgtgcaggcaggctatcaagtggcggttcttgtgcctacc
acgctgcttgcagggcagcatgaggacagttttttgagcagatttgctgattggccaatt
aaaattgaaagtctttcgcgatttggtaataaaaaacaccacgaaaaagtcatcaaaggt
ctggcagaaggcgtggtggatattgtcatcggcacgcataagttgattcaggacgatgtt
aaatttaagcgtctaggcttgatgattattgatgaagagcatcgttttggcgtgcggcac
aaagagcgaatcaaggcattgcaaagcaatattgacagtctatctatgacagcaacgccc
attcctcgcacgctgaatatggcattgtctggtatgcaggatatttctatcattgccaca
ccgcctgccagacgcttgcccatcaagacttttttgttgccaaaatcagacagtacaatt
gttgatgcgattttgcgtgagattttgcgtggtgggcaagtgtattatctgcacaatgat
gttgccagcatcgaggcggcagcggatagcttgcgagagctggtggggcaggctcgcgtt
gcggtggcacatggacagatgaatgagacagagctgtcgatggtgatgagcgatttttat
cacaaaaaattcaatgtcttggttgcaagcaccatcatcgaaacaggcattgatgtacca
aatgccaacaccatcatcattcaccgagcggataaatttggtatcgctcagctgcatcag
ttgcgaggtcgtgtcggacgcagtcatcatcaagcctactgttatctgcttgtgccttcg
ctaaaaggactaagtgcagatgccaaaaaacgccttgatgccatcactcgtgccaatact
ctgggtgcaggatttatgctggcttcagaggatttggaaattcgtggtgctggcgaaatc
ttgggcaaggaacaaagtggcaatatgcaaaccattggctttgggctatacatggatatg
cttgagcgtgcaaccaaggccatcaagcagggcaaaacaccaagccttgccacgccactg
gacttaatcagcgaaattgacattcatgcttcggcactgattcccgagagctatttggct
gatgtgcatgagcggttgttattttataaaaaaatcagtagcttagatgatatcgcagca
ctgattgctgtgcgtaccgagatgattgaccgatttggtgccttgcctgttgccacccag
aatttatttgctgtgcatcgcattcgcattcgcagtaaggcgttgggcattgctaagatt
gacgcaacagacagggttattaccatcttgtttcgccctgatactttggttgatggtctg
gcgattattaagctgattcaatctggcgatggctatcgtatgcttggcgaaacgacaatc
cgccatcaaagcccatcggtgatggacacgcaagcacgccttgacaaaatccatgagctg
cttttgtattttgaggcaaatactgttcgcttagccagttaa
DBGET
integrated database retrieval system
