Mycobacterium canettii CIPT 140070008: BN43_60202
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Entry
BN43_60202 CDS
T02420
Name
(GenBank) Putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcv
Mycobacterium canettii CIPT 140070008
Pathway
mcv03420
Nucleotide excision repair
mcv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN43_60202
03430 Mismatch repair
BN43_60202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcv03400
]
BN43_60202
Enzymes [BR:
mcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN43_60202
DNA repair and recombination proteins [BR:
mcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN43_60202
MMR (mismatch excision repair)
Other MMR factors
BN43_60202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCK57253
LinkDB
All DBs
Position
complement(3605105..3608410)
Genome browser
AA seq
1101 aa
AA seq
DB search
MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL
VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG
SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG
EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE
RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG
GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL
RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD
GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA
GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI
SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG
GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV
QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV
LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP
RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR
GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP
NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP
GAADREVGDPEELAALQRAFAASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG
ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE
LPAPGELAMLLTDCAGRRSDT
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaccgcggcaccggcacgctacagtccagctgaactagcctgcgcgctagga
cttttcccgcccaccgctgagcaggccgcggtaatcgccgcacctcccggcccgctggtc
gtcatcgcgggagccggcgccggaaaaaccgaaacgatggctgcccgggtggtgtggctg
gttgccaacggctacgcggaacccggccaggtgctgggattgacgttcacccgcaaggcc
gcgggccagctgttgcgccgcgttcggtcccgtctggccaggttggccggtatcggcctc
ggctgcggcgacccggcggcctgcgctccggtagtcagcacctaccacgcctttgccggc
tcgctactacgcgactacggcctgctgctaccgctggaacccgataccaggttgctgagc
gagaccgagctgtggcagctggcattcgatgtggtcagcgggtacgacggcgtgctgtgc
accgacaagagcccggcggcggtcacctcgatcgtggtgcggttatggggccagcttggc
gagcatctggtcgacacccgcgcgcttcgcgacacccacgtcgagctggaacggctggtc
cacgctctgccggcgggccgctatcagcgtgaccgcggccccagccagtggctgctgcgg
atgctggccacccagacccagcgcgcggagttggtgccgttgcttgacgcgttgggtgag
cggatgcacgccggcaaagtgatggatttcgccatgcagatggcctcggccgcacggttg
gcggcgacctctccccaagttggccaggatctgcggaggcgctaccgggtggtgttactg
gacgaataccaggacacggggcacgcgcagcgcgttgtgttgtcgtcgctgtttggcggc
ggcgttgatgacgggttggcgctgacggctgtcggtgacccgattcagtcgatctacggg
tggcgcggcgcttcggcgacgaacctgccccggttcaccaccgacttccccttatcggac
ggcacccccgcgccggtgctggagctgctgaccagctggcgcaacccgccgcaagcgctg
cgcgtggccaatggcatatcggcggaggcgcggcggcgctcggttgcggtgcgcgcgttg
cggccgcgtccggatgccccgcctggagccgtccgctgcgcgttgcttcccgacgtgcag
gccgaacgcgaatggatcgccgaccacttgcggatgcgttaccagcgggcagaagcggac
ggtgtcaagccgcccaccgcggcggtgctggtacgccgcaacgccgacgccgccgctatc
gctgataccctgcgggcccgcggaatcccggctgaagttgtcgggctggccggcctactg
tccatccccgaggtcgccgaggtagtggctatgctgcgcctggttgccgacccaacggcc
ggggcggccgcgatgcgggtgctgactggcccacggtggcggctcggcgcccgggacctc
gccgcgctgtggcggcgtgcgctgacgctgagtggcgaatcaccgtcaacggcgtcgccc
gaatcgatcgcgatggcggccagcgcggacgccgacaatccgtgtctggccgacgccatc
agcgatccaggttccgccgaggggtattcggtggcgggatatgggcgcatcggcgccttg
gccggtgaactgagcgcgctgcgcggtcgcctcggtcattccctgcccgacctagtagcc
gaggtgcgccgcgtgcttggcgtcgattgcgaggtgcgggcctcggccccggtctcaggt
ggctgggccggacccgagcaccttgatgcgttcgccgacgtggtcgcggggtacgccgaa
cgggccagcgctaggtccagcgaggcgtcggttgcgggcctgctggcttatttggacgtc
gccgaggtggtcgagaacggtttgccgcctgccgagttgaccgtcgcctgcgaccgggtc
caggtgctgaccgtgcacgccgccaagggcttggaatggcaggtggtggcggtggcacac
ctgtcgcgcggagtgtttccgtcgacggtgtcgcgcagcagctggcttaccgaccccgcc
gaactaccgccgctgctgcgtggggatcgcgcctcggccggcgcgcacggcatccccgta
ctggacacgtcagctgtcgctgaccgaaaacagttgtcggacaagatctccgaacatcgt
cgcctgctcgatcggcggcgcgttgacgaggagcgtcgactgttgtacgtggccgttacc
cgggctgaggacactctgctggtgtccggccaccattgggggcccaccgggacaaagccg
cgcgggccatcggaattcctgtgcgaactcaaggacatcattgaccgttcggccgctgcc
ggtgatccttgcggagtcgtcgagcagtgggcgtcggcgcccgccggcgatgagcgaaac
ccattgtgtgacaacgctatcgaggcggtttggcccgctgatccgttggccgcacgtcgc
ggcgatgtggagcggggcgcggcgctggtggcggcggccatgtcggccgacttgcccgga
agcaccaccgacatcgatcatcccccgcgcccgggcgatgccccctggtccactgacgtc
gatgcactgttggctgaacgtgcgcacgcggcgcggggagcacctgcccgtggtctgccg
aaccatttgtcggtcagcagtttggtggagctggtcggcgacccggtcggtgcgcggcag
cggctgatgtgtcggctgccaaaacgcccggacccgcacgcgtggttgggcgatgcattt
cacgcctgggttcagcaattttacggtgctgaactgctgtttgacctgggtgacctgcca
ggtgcagcggaccgcgaggtgggcgatcctgaggagttggccgcgttgcagagggcgttc
gccgcatcatcgtgggcggctcgcaccccggcggcggtcgaagtgccgttcgaaatgccg
atcggcgataccgtggtgcgcggccgcatcgacgcggtgttcgtcgaccccgacggcggt
gccaccgtggtggactggaagaccggcaagccgccgcacgggccggcagccatgcggcag
gccgctgtccagctcgctgtctatcgactggcctgggccgcattgcggggatgtccgaca
tcctcggtgcgtaccgccttctattacgtgcgcagcggcatcacggtcgtccccgacgag
ttacccgctcccggcgagttggccatgctactgaccgactgcgccggtcggcggtcggac
acctga
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integrated database retrieval system
