Mycobacterium canettii CIPT 140070010: BN42_10225
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Entry
BN42_10225 CDS
T02421
Symbol
sigG
Name
(GenBank) Putative alternative RNA polymerase Sigma factor SigG (RNA polymerase ECF type Sigma factor)
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mcx
Mycobacterium canettii CIPT 140070010
Brite
KEGG Orthology (KO) [BR:
mcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcx03021
]
BN42_10225 (sigG)
Transcription machinery [BR:
mcx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN42_10225 (sigG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
SnoaL_4
NTF2
Acetyltransf_6
Motif
Other DBs
NCBI-ProteinID:
CCK58198
LinkDB
All DBs
Position
complement(227987..229099)
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AA seq
370 aa
AA seq
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MRTSPMPAKFRSVRVVVITGSVTAAPVRVSETLRRLIDVSVLAENSGREPADERRGDFSA
HTEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYEGFAGKSSLRTWLHRIATNTCL
TALEGRRRRPLPTGLGRPSADPSGELVERREVSWLEPLPDVTDDPADPSTIVGNRESVRL
AFVAALQHLSPRQRAVLLLRDVLQWKSAEVADAIGTSTVAVNSLLQRARSQLQTVRPSAA
DRLSAPDSPEAQDLLARYIAAFEAYDIDRLVELFTAEAIWEMPPYIGWYQGAQAIVTLIH
QQCPADSPGDMRLISLIANGQPAAAMYMRAGDVHLPFQLHVLDMAADRVSHVVAFLDTTL
FPKFGLPDSL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacatcgccgatgcccgcgaaattccgttcagtccgggtggtagtcattaccggg
agcgtaacggctgctccggtgagagtgtcggagactctgcgtaggctcattgacgtgagt
gtgctcgcagaaaactctggccgcgagcccgccgacgaacggcgcggggacttctccgcc
cacaccgagccctaccggcgtgaactgctcgcacactgctatcgcatgaccggctcgctg
cacgacgcggaagaccttgttcaggagacgctgctgcgggcctggaaggcctatgagggc
ttcgcgggcaagtcctcgctacgcacttggctgcatcggatcgccaccaacacctgcctg
acggcgttggagggccgtcgacgccggccgttgccgacggggctcgggcggccaagtgcc
gatccgtccggggagttggtggaacgtcgagaggtgtcctggctggagccgctgccggac
gtgacggatgaccctgctgatccctcaacgatcgtcgggaaccgggaatcggtgcggttg
gcctttgtggcggctctgcagcacctctcaccccggcagcgagccgtactgctgctgcgc
gacgtgctgcagtggaaatcggccgaggtggccgacgcgatcggtaccagcaccgtcgcc
gtcaatagcctgctgcagcgggcccgctctcagctgcagacggtccggcccagcgccgcc
gaccggttgtccgcgccggattcacccgaggcgcaagacctgttggcccgctacatcgcc
gcgttcgaggcttatgacatcgaccggttggtcgagctgttcaccgccgaggcgatctgg
gaaatgccgccgtatatcggctggtaccagggcgcacaggccatcgtcaccctcattcac
caacagtgccccgccgattcgcctggcgatatgcgcctgatttcgttgatcgccaacggc
cagcccgccgcggccatgtacatgcgtgccggtgacgtgcacctgccttttcagctacac
gtgctggacatggccgccgaccgcgtgtcacacgtggtggccttcctcgacaccaccttg
ttcccgaaattcggcctgcccgattcgctgtga
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