Musca domestica (house fly): 101891258
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Entry
101891258 CDS
T03448
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
mde
Musca domestica (house fly)
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mde03041
]
101891258
Enzymes [BR:
mde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101891258
Spliceosome [BR:
mde03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101891258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
R3H
HA2_C
OB_NTP_bind
AAA_22
nSTAND3
ATPase
ResIII
AAA_19
HA2_N
AAA_11
PhoH
Ank_5
Flavi_DEAD
AAA_23
Ank_2
T2SSE
dATP-dGTP_PPHyd
Ank
Motif
Other DBs
NCBI-GeneID:
101891258
NCBI-ProteinID:
XP_005191426
UniProt:
A0A1I8MJU2
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MSTNANATRRRRQKPPAGSTNSNSAHSSNSGNRNNGKVERVNIPESDRLPLQTKIANFLA
SAEDEIVLKGLSNLHRKYLHQYAAQRGLKSKSYGSKNNRELHISKRKRLVTLGDSQPLHM
APATRAMLQTLMPAIQSQLVANQALLQSNTHRHKGIRSESLSVALGPRMVPPRPQRISNE
LFRDKQELPIYHYQAELYQMLKQHNVFIINGETGSGKTTQVPQYILNDATRRNRPCRIVV
TQPRRVAAVSVAHRVAEERGEPLGETVGYQIRMESRVKKTSNLIYTTSGCFLRSLMSDVR
DLFRKVSHLIIDEIHERDKNTDFTLITVKEQLKLNKDLKVILMSATMDIQLLSKYFDNCP
VLNVPGQGYDVKIYHLEDILYHTGYRTALMEKYLRSMNDNFPMPVTMFDDNILESGHRNT
AERLEDEYLQQVLDTLIEQCCDNLEMKTREELHEMFDQIQYYIESEGMTINAGHSESGIT
PLMAGCKCNMPDFVQFAVRRQANVLIRDNDGYEAIDYARLHPDGLCLQIIMNASQCMNTV
KQQEELSQQDKEKQKVLLAYQQQFNDDNEVDHDLILSLLEGLYRNAHPGAIMVFLPGYND
IVQQRNLIQSTLPGGTYKLCILHGQMDSKDQFEALQQHPVRKIILSTNIGQTSITIPDLA
YIIDSGKVKMNTYDSITESSQLQSIWISQADACQRSGRAGRTQNGVCYRLYSTAKYQFMP
QFSIPEFMRIPLTEICLYAKTLEPKCEVQQYLQKSLNPPSSFSIQNALRKLKILGVFRDD
ESVTELGKHLVDIPLDVQLGKCLLYGVFLKCYDPILTICSYHSVKDPFILPTDRSAQGQA
SFQRKSFAGQSFSDQMGILALYKAYMEIRHNPRKVRDFCNKYFLSHSAMEMFCATRKQIN
DVMKNKFNINYMDKMFNNDWHMIQLCLVAGFYPNVALIDRKEFKLICGAEKQLILQRSSA
LNPPGKKHLKEFINQMPHDWIVFFEKSRISNTCTINMNTVVPALMIALQCGRDCEVLNSA
TGSPYGEEDYDDDDDEDNEYNATADDEDGASDSESSDKSLETSNAPPPPPVPSNDLEALQ
LKLAKTMENISLSNANSKSILSLDNWIKFELSPGDAKLLLLMRIALHTQFQAFLRTGPNS
NTSNVAYCLQKLLHSLNNNGQVMKFSV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaatgcaaatgcgactcgaagacgtcgtcaaaaaccaccagccggttccacc
aattccaattctgcacattcgtcgaactctggaaaccgtaacaatggtaaagttgaacgt
gtcaacataccggaaagcgatcgactgccgttgcaaacaaaaatagcaaattttcttgcc
agtgccgaagatgagattgtgctgaagggtctcagtaacttacatcgaaagtatttacat
caatatgctgcacaacggggtctaaagagcaaaagttatggctcgaagaacaatcgagaa
ttacacataagtaaacgtaaacgactagtgacactgggcgattctcagccgttgcacatg
gctccggccaccagggctatgctgcaaactctaatgccggccatacaatcacaattggtt
gccaatcaggctctattgcaatcgaacacacatcgacacaaaggtatacgcagtgaatcg
ttgtcggtggccctggggccacgcatggttccaccgagaccgcaacgcataagcaatgaa
ctatttcgggataagcaggaattgccgatatatcactatcaagctgaactttatcaaatg
cttaagcaacataacgtcttcatcataaatggcgaaactggctcgggaaaaacgacacaa
gtcccccaatacattttgaatgatgccacaagacgcaatagaccatgtcgcatagttgtt
actcaaccccgtcgggttgctgctgtttctgtggcccatcgtgtggctgaagaaagagga
gaaccgctgggagaaacggtgggctatcaaatacgtatggaaagtcgcgttaaaaagact
tcgaatttaatctacactacatctggttgttttctacgttcactaatgtcggatgttcgt
gatctatttcgcaaggtgtcacatttgataatcgacgaaatacacgaacgtgataaaaac
acagactttacattgatcacggtgaaggaacaattgaaattgaacaaagatctcaaagta
attctcatgtctgccaccatggatattcaattgttatcgaaatattttgataactgtcct
gtattaaatgtacccggtcaggggtatgatgttaaaatctatcatctcgaagatattctc
tatcacacgggatatagaacagcccttatggaaaaatatctacgttcgatgaatgataat
tttcccatgcctgtgacaatgttcgatgataatattttggaatcgggtcatagaaatacg
gcagaacgtttggaggatgaatatttgcaacaagtattggacacactcatcgaacagtgt
tgtgataatttggaaatgaaaacccgagaagagttacatgaaatgttcgatcaaattcaa
tattatattgaaagtgagggtatgaccattaatgccggtcattcggagagtggcattacc
ccactgatggcaggctgtaaatgtaatatgcccgattttgtacaattcgccgtacgaagg
caggcgaatgtcttgatacgtgataatgatggttatgaggcaattgattatgcgcgtctg
catccggacggtttgtgtttgcagataataatgaatgcctcacagtgtatgaacaccgtc
aaacaacaggaagaattgagccaacaagataaggaaaaacaaaaagtcctgttggcatat
cagcaacaatttaatgacgacaatgaagtcgatcatgatttgattttatccctgctcgaa
ggactttatcgtaatgcccatccgggcgccataatggtattcttgccgggctataatgac
atagtacaacagaggaatttaatacaaagcacattgcccggtggcacatataaattgtgt
atacttcatgggcaaatggattcgaaagatcaatttgaggccctgcaacagcatccggta
cgcaagatcatactctcgacaaatattggtcaaacttccattaccatacccgatttggcg
tacattattgattcgggtaaggtgaaaatgaacacatatgactccataactgaatcatcg
caattgcaatccatatggatatctcaggctgatgcctgccagcgatccggacgtgcaggt
cgtactcaaaacggtgtctgttatcgcctctattcaacggcaaaatatcaatttatgcca
caatttagcataccggagttcatgcgcatcccattgactgagatatgcctgtatgccaag
acgctagagccgaagtgtgaagttcaacaatatttacagaaatccttaaatcctccttcc
agttttagcattcaaaatgcattaagaaaattaaagatcttgggcgtgtttcgagatgat
gaatctgttacggaattgggcaaacatttggtggacatacctttggacgtacaattgggc
aaatgtttgctttatggtgtgtttttaaaatgctacgatcccatactgaccatatgttcg
tatcattcggttaaggatccatttatattgcccacagatcgctcagctcagggccaggca
tcatttcagagaaaatcatttgccggccaatcatttagtgatcaaatgggtatattggct
ttgtacaaagcctacatggaaatccgccataatccaaggaaggtgagagatttctgtaat
aaatacttcctgtcacactcggccatggaaatgttttgcgcaacacgcaaacaaatcaat
gatgttatgaaaaataaattcaatataaattacatggataaaatgtttaacaatgattgg
catatgatacaattgtgtttggtggctggattttatccgaatgtggcattgattgatcgc
aaggaatttaagttgatatgtggtgcggaaaagcagcttatattacagagatcatcggca
ctgaatccgccaggtaagaagcatttgaaggagtttatcaatcaaatgccacacgattgg
attgtgtttttcgaaaagtcacgcatttcgaatacgtgtacaatcaacatgaataccgtt
gttcccgcccttatgattgctctgcaatgtgggcgtgactgtgaggtattgaatagtgcc
accggcagtccctatggtgaagaagattatgacgacgacgatgatgaagacaatgaatat
aatgcaacggctgacgatgaagatggtgcctcagattcagagtcttctgacaaatccctg
gagacatcaaacgctccacctcctccccctgtaccttcaaatgatttggaagctttgcaa
ttaaaattggcaaagaccatggaaaacatatcgctaagtaatgccaatagcaagagcatt
ttatcattggataattggattaaatttgagctatcaccgggtgatgcaaagttattgctt
ctcatgcgcattgcgttgcacacgcaattccaggcatttttaagaacaggcccgaattca
aatacatcaaatgtagcatattgcctgcaaaagttattgcattcattgaacaacaacggc
caggttatgaaattttcagtttaa
DBGET
integrated database retrieval system
