Methylomonas sp. DH-1: AYM39_08950
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Entry
AYM39_08950 CDS
T04396
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AYM39_08950
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mdh01007
]
AYM39_08950
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdh03016
]
AYM39_08950
Enzymes [BR:
mdh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
AYM39_08950
Amino acid related enzymes [BR:
mdh01007
]
Aminoacyl-tRNA synthetase
Class II (U)
AYM39_08950
Transfer RNA biogenesis [BR:
mdh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AYM39_08950
Prokaryotic type
AYM39_08950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ANE55290
UniProt:
A0A172U7J3
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All DBs
Position
1958214..1960589
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AA seq
791 aa
AA seq
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MQVSEAWLRELVNPPIDTAELVAQLTMAGLEVDAVTPVAANFTGVVVGEVLETVQHPNAD
KLRVCQVNVGQEQPLQIVCGASNVRPGLKVPAALIGAVLPGDFKIKESKLRGELSFGMLC
SEKELGLAASSEGLMELPADAPVGRDIRDYLLLNDNVIELGLTPNRADCLSVVGVAREVA
VLNGVQLNVFDCANIKPQHAQTLEVHVQAPEACPVYLGRLIKGINPAAQTPLWMQERLRR
SGIRSLSPVVDVTNYVLVELGQPLHAFDADKLSAPVVVRRSRAGEPLALLNDQSIELDGE
ALVIADQREALALAGVMGGKDSAVYGETRDIFLECAFFNPISIAGKARQFGLHTDSSHRF
ERGVDFNLQRRAIERATQLILAIAGGSPGPVTEVISSEALPNRSAVKLRSARIEKVLGIQ
YSDAQVHDLFGGLGMQIARCEGGWDVTPPSFRFDIAIEEDLLEEIGRVYGYNNLPSSSLL
MRSELGQAPESVLALERLQDCLVDRGYQEAITYSFVDEAMQNAMAPGDEFIKIQNPISSE
LAVMRTTLWCGLVNAALYNINRQQSRVRLFETGLRFFYEEGRIQQHKVLAGLALGQIHPE
QWGEKSRKVDFFDVKADVEALLGLSASKMRFEATQHPALHPGQSARILTTCGEAIGLLGM
LHPTLQKQLGFDNPVFLFELSQEAILQRNVPKFSPLSKFPSVRRDMALLVAEEVSADAIL
ACIAESDEQAIRDVSVFDIYRGQGVAEGSKSVALSLVLQDFSQTLTDAEIDAIFRRVLET
LTAKLNAKLRE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttagtgaagcttggttaagggaactggtcaatccgcctatcgacactgccgaa
ttggttgcgcaattgaccatggccggcctcgaagtcgatgcggtcacgccagtcgccgct
aattttactggcgtagtggtcggtgaagtactggagaccgtgcagcatccgaacgccgat
aaactcagggtctgccaagtcaatgtcggccaagagcagccgctgcaaatcgtttgcggc
gccagtaacgttcggcccggcttaaaggtgccggcggcattgatcggcgccgtattgccg
ggcgatttcaagattaaagaatccaaactacgcggcgagttgtcgtttggcatgctctgt
tccgaaaaggaattagggttggccgccagctcggaaggtttgatggaattgccggcagat
gcgccggtagggcgagatatccgtgattatttgttgttgaacgacaatgtgatcgaattg
ggactgacgccgaatcgtgccgattgtttgagtgtggttggggtcgccagggaagtggcg
gtgctgaatggcgttcagttaaacgtattcgattgtgccaatattaagccgcagcatgca
cagaccttggaggtgcatgttcaggctccggaagcctgtccggtttacttggggaggttg
atcaaaggcatcaatcccgctgcgcagacgccgctgtggatgcaagagcgcctgcgacgc
agcggtatccgcagtctcagcccagtagtagacgtcactaactacgttctggttgagctg
gggcagccgttacatgctttcgatgctgataagttatcggcgccggttgtggtccgtcgc
agtcgggccggcgagcctttggcattgttaaacgaccagtcgatagaactcgatggcgag
gccttggttattgccgatcagcgggaagcgttggcgttggctggcgtgatgggcggaaaa
gacagtgcggtatatggcgaaacccgcgacatttttctggagtgcgcttttttcaatcca
attagtattgccggtaaggcacggcagtttggattgcataccgattcctcgcaccgcttc
gaacgcggcgtcgatttcaatttgcaacgtcgagccatcgagcgggccacgcaattgatt
ttggcaattgcggggggaagcccaggaccggtgaccgaagttattagtagcgaagcttta
ccgaaccgttcggcggttaagttacgtagtgcgcgaatcgaaaaagttctgggtatccaa
tacagcgatgctcaagtccatgatttgttcggcggcttgggcatgcagatagctcgttgc
gaaggtggttgggacgttactccgcccagctttcgtttcgacattgcaatcgaggaagat
ctgctcgaagaaattggccgggtatacggctataacaacttgcccagcagtagtttgttg
atgcgttccgaattaggtcaggcgccggaatctgttttggcgttagagcgattgcaggat
tgcctggtcgatcgcggttatcaagaggctattacctatagtttcgtcgatgaagcgatg
caaaatgcgatggcgccgggcgacgagtttattaagatccagaatccgatttcttccgaa
ttggccgtaatgcgtaccactttgtggtgcgggttggtgaatgccgcactttacaatatc
aataggcagcagagtagggtgcgcctgttcgagaccggtctgcggtttttctatgaagag
ggtcggattcaacaacacaaagtacttgccgggctagcgcttggtcaaattcatcctgaa
caatggggggagaaatcgaggaaggtcgattttttcgatgtgaaagcagatgtcgaggcc
ttgctgggattgtcggcgagcaagatgcggttcgaagcgacccaacatccggcattgcat
cccggacaatccgctcgaatactgactacatgcggcgaagcgattggattgctgggtatg
ttgcatccgacgttgcagaaacaattgggcttcgataatcctgtatttttgttcgagttg
agtcaggaagccattctgcagcgcaacgtgcctaaattcagtcctttgtccaaatttccg
tcggtacgtcgggacatggcattgttggtggcagaagaagtatctgccgacgcaattctc
gcatgcatcgctgaatctgatgagcaagccattcgcgatgtctcggttttcgatatctat
cgcgggcagggcgtagcggaaggcagcaaaagcgtggcgttgagtttggtcttacaagat
ttttcgcaaactcttaccgacgctgaaattgatgctatatttcgcagagtgttagagact
ttgacggctaaactaaatgcaaaattgagggagtga
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