KEGG   Methylomonas sp. DH-1: AYM39_09180
Entry
AYM39_09180       CDS       T04396                                 
Name
(GenBank) type I-F CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
mdh  Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:mdh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mdh02048]
    AYM39_09180
Enzymes [BR:mdh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AYM39_09180
Prokaryotic defense system [BR:mdh02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    AYM39_09180
SSDB
Motif
Pfam: Cas3_I-F_Cas2 DEAD Cas3_HD ResIII
Other DBs
NCBI-ProteinID: ANE55330
UniProt: A0A172U7N2
LinkDB
Position
2002336..2005674
AA seq 1112 aa
MMVTFVSQCQKKALARTRRVLDAFANRIGDNTWQTVITEEGLIAVKTLLRKTATKNTAVA
CHWIRSRSRSELVWIVGNRKRFNAEGIVPVNSTQKNVLNNHWENNWTYLPAIKALVAVAA
LLHDWGKATALFQSKLKSSTNQGDPLRHEWISCLLLNGLVRLAGGEDEAWLQLLGDDNWD
EAALKNLTAENLKNPLADLPPIAQLVGWLIMSHHRLPSRLKPNDVGDQKRETLASMLKSL
NADWGYQNPNDEDKRLKACFEFPEGLLSQSEPWRKQLKKWSGKLLQNQACIQALLDNGAY
RLLLHHARLCLMLGDHYYSSCQADGEWQSAIDLYANTDSQKRLKQKLDEHLVRVGDQALK
ISQTLSRFSSEMDAAYDIKSLKQKSPAGFEWQDKAVDGIARFKTQHQAQQEQGYGWFVVN
MASTGCGKTVANAKVMRSLSDDGDSLRYVLALGLRTLTLQTGNEYRNRLGLTDQDLAVLI
GSAAIKQLYDKAAREKDQPPGYEDIGSESREQLLAEDLDFGDMPHAEFLDVLFPKHQPKL
AEKHKAFLYKPVLACTIDHIIAATETRRGGKFILPCLRLLSSDLVIDEVDDFDGTDLIAI
GRLIHLAGMLGRKVMISSATIPPDLAEGFFHAYQAGWQLHSHFKAAHPLVACAWIDEFGT
QVERLDNVDSDSRCRQYALLHRQFVAKRVGYLHKQLVKRKATIERCDELLALKNQPAEQR
QQYFAKIRQAAEHLHSHHHSVDAKTGKRVSFGVVRMANIPPCVALTHYLLQADWGNGIEP
KIMAYHSRQVLLLRHEQEKHLDEILQRKEKPGQTPKAFQEPTIRRHLDSTAADDVLFILV
ATPVEEVGRDHDFDWAVIEPSSFRSIIQLAGRVLRHRRISTDVEHANIAVMQYNLKALRQ
TGGPAYCRPGYENGKSLRLTSHDFGQLVDEAALNQVVNAVPRIQRPEKLEPKQRLADLEH
QALHQSLTDYRQQGPQALQAWLYENWWLTAVPQQINPFRAGNPETSLFLVWRDGKALFCE
KDERGQFIVLQAFHKISRMPQPSLEEQARLWLDRAYENILRQHAETEPSGDDADSEQRLQ
AASERFGEIMIRPDSDKPWFYSDQLGLFQDMN
NT seq 3339 nt   +upstreamnt  +downstreamnt
atgatggtcaccttcgtcagccaatgccaaaaaaaggcgttggcccgcacccgccgcgtc
ctggacgccttcgccaaccgcatcggcgacaacacctggcaaaccgtgatcaccgaagaa
ggcctgatcgccgtcaaaaccctgttgcgcaagacggccaccaaaaatacggcggtggcc
tgccattggatcaggtccagaagtcgaagcgaattggtttggatagtcggcaatcgcaag
cgcttcaatgccgaggggattgtgccggtgaatagcacccaaaaaaatgtgctgaacaac
cattgggaaaacaattggacctatctgccggccattaaagccttggtggcggttgcggct
ttactgcacgattggggcaaagccacagccttgttccagagtaagcttaaatcctcgact
aaccaaggcgatccgctgcgccacgaatggatttcctgcctgttacttaacggcttggtg
cggctggccggcggtgaagacgaagcttggctgcagctattgggcgatgacaactgggac
gaagcggcgttaaagaatcttaccgccgaaaacctgaaaaacccgttggccgatttgccg
ccgattgcgcaattggtcggctggttgatcatgagccatcaccgcttgccgagtcgctta
aagccaaacgatgtaggcgatcaaaaacgcgagaccctggcgagcatgttgaaaagcttg
aacgcggactggggttaccaaaatccgaatgacgaagataaacgcctgaaagcctgcttc
gaatttccggaaggcttgctttcgcaatccgagccgtggcgcaaacaactgaaaaaatgg
tctggcaaattgctgcagaaccaagcgtgtatccaagccttgctcgacaacggcgcctat
cgcctgttgctgcaccatgcccgcttatgcctgatgctgggcgaccattattactcgtcc
tgccaagccgacggcgaatggcagtcggccatcgacctttacgccaacaccgacagccaa
aaacggctgaagcaaaaactggacgaacatttggtccgcgtcggcgatcaagccttgaaa
atcagccaaaccttgtcgcgcttcagcagcgagatggatgcggcctacgacatcaaaagt
cttaagcaaaaaagtcccgctggcttcgaatggcaggataaagccgtggatggcattgcc
cgcttcaaaactcaacatcaagcccagcaagaacaaggttacggctggtttgtggtgaat
atggccagtaccggctgcggcaaaaccgtggccaacgccaaagtcatgcgctcgctgtcg
gacgacggcgacagcctgcgttacgttctggccttgggtttgagaaccttgaccttgcaa
accggcaacgaataccgcaaccgcttgggcttgacggaccaggatctggcggttttgatt
ggctcggcggcaatcaaacagctttacgacaaagctgcccgggaaaaagaccagccaccg
ggttacgaagacatcggttccgagtcccgagagcaactattggcggaggatttggatttc
ggcgacatgccgcacgccgaatttctcgacgtgctgtttcccaagcatcaacccaagctg
gccgagaagcacaaggcgtttttatacaagccggtgttggcttgcacgatagaccacatc
atcgccgccaccgaaacccggcgcggcggaaaattcatcctgccgtgcctgcgcctattg
tcgtccgatctagtgatcgacgaagtagatgactttgatggcaccgatttgatcgccatc
ggccggttgatccatttggccggcatgctgggccgcaaggtgatgatttcctccgccacg
attccaccggatttggccgaaggttttttccatgcctatcaggccggctggcaattgcac
agccatttcaaagccgctcatccgctggtggcctgcgcctggatcgacgagttcggtacg
caagtcgaacggttggacaacgtggattccgatagccgttgccggcaatacgcgctgtta
caccggcagttcgttgccaaacgagtcggctatctgcacaagcaactcgtcaaacgtaaa
gccacgattgaacgttgcgacgagttgttggccttgaagaaccagcccgctgaacagcgc
caacagtatttcgccaaaatccgccaggctgccgaacatttgcactctcatcaccacagt
gtcgatgccaaaaccggcaagcgggtttcgttcggcgtagtgcggatggcgaacattccg
ccctgcgtcgcactgacacactacctgttgcaagcggattggggcaacggcatcgagccg
aaaatcatggcttaccacagccggcaagtgctgctattacgtcatgaacaggaaaaacat
ctggacgaaattttgcagcgcaaggaaaaaccgggccaaacgccgaaggcatttcaggaa
cccacaatccgccggcatttggattccacggcagccgatgacgtattgtttattctggtg
gcgacaccggtggaagaagtcggccgcgaccacgatttcgattgggccgtcatcgaacca
tcgtcgtttcgttccatcatccagttggcaggccgggtgttacgccatcgccgcatttcg
accgatgtcgaacatgccaatatcgccgtgatgcaatacaacctgaaagccttgcggcaa
acgggcggcccggcttattgccggccgggttacgaaaacggcaaaagtctgcgattgacc
agccacgacttcggccaattggtggacgaagccgcgttgaaccaagtcgtcaacgccgtg
ccgcgcattcaacgcccggaaaagctggaaccgaaacagcgtctggccgacctggaacac
caagccttgcatcaaagcctgaccgattaccggcaacaaggcccgcaagccttgcaggcc
tggctatacgaaaactggtggctgaccgccgtgccgcagcaaatcaacccgtttcgcgcc
ggcaatccggaaacttcgctatttttggtttggcgagacggtaaagcgctgttttgcgag
aaggacgaacgcggccaatttatcgtccttcaggctttccacaaaatctctcggatgccg
caaccatcattagaagagcaagcccgattatggctggatagagcttatgaaaatatcttg
cgccaacacgctgaaaccgaaccgtccggggacgatgccgattcggaacaacgattgcag
gccgcatccgagcgtttcggcgaaatcatgattcgcccggacagcgacaaaccttggttt
tattcggaccagttaggtttgtttcaagatatgaattag

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