Methylomonas sp. DH-1: AYM39_20585
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Entry
AYM39_20585 CDS
T04396
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AYM39_20585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdh02000
]
AYM39_20585
Transporters [BR:
mdh02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
AYM39_20585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
ANE57338
UniProt:
A0A172UDW8
LinkDB
All DBs
Position
complement(4636463..4637581)
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AA seq
372 aa
AA seq
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MPSAGRPFRLFTVLDKMIIKELFFTVTAVLTVLVVIIVSRKFIRVLALAIEGNIANDTVM
ALLGMKIVIATTAFLPAALFMAVLMVLGRMHREQEMSAISSAGGGAFTIYRAVFLLVVPL
SLLGVGLSMFAAPWAEARTEELMHQDKQNADIRGISAGRFSEYSDGELIFYTETVDDEGH
MHHVFVQNKQGGKLGVVNAESGWLRNLPGGLYLVLENGQRVMGVPGNKDFVIEAFQEYSV
LIEKKVTVLSLGREAIPTKALWVSQELRDVAEVQDRLNTPLGVVLLAVLAVPLAKLSPRG
GIYGSMLVAFGIYFVYGNLQRVNHSWVISGALPAWVGYFWVDTALLLLGLAMLVRLYGWR
WCLQSLTGKVAG
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgccggccggccgtttcggctgttcaccgtgctggataaaatgatcatcaag
gagctgttttttaccgtcacggcggtgctgacggttctggtggtgattatcgtcagccgc
aaattcattcgggtactggctctggctatcgagggcaatatcgccaacgataccgtgatg
gccttgctgggcatgaaaatcgtcatcgccaccacggcctttttgccggcggcgttgttc
atggcggtgttgatggtgttggggcggatgcaccgcgaacaggaaatgtcggcgatttcg
tcggccggcggcggcgcgttcacgatttaccgggcggtgttcctgctggtggttccgctc
agtctgcttggcgtgggcctgtcgatgttcgcggcgccgtgggccgaggcgcgcaccgaa
gaattgatgcatcaggacaagcaaaatgccgatattcgcggtatttccgccggccgcttc
agcgagtacagcgacggcgagctgattttctacaccgaaacggtggacgacgaaggccac
atgcaccatgtgttcgtgcaaaacaagcagggcggcaagctcggcgtggtcaacgccgaa
tcgggttggctgagaaatttgccgggggggctgtatttggtgttggaaaacggccagcgg
gtgatgggtgtgcccggcaataaggatttcgtcatcgaagcgtttcaggaatattcggta
ctgatcgaaaaaaaggtcacggtgttaagcctgggccgggaggccattccgaccaaggcg
ttgtgggtgtcgcaggaattgcgcgatgtcgcggaagttcaagaccggttgaatacgccg
ctgggcgtggtgttgctggcggttttggcggtaccgctggccaaactgtcgccgcgcggc
ggaatctacggcagtatgctggtcgctttcggcatttactttgtctatggcaacctgcag
cgggtcaaccatagctgggtcatcagcggtgcgctgccggcctgggtcggttatttttgg
gtggatacggccttgctgttgctgggattggccatgctggtacgtctgtacggctggcgc
tggtgtttgcaaagtctgacaggaaaggttgccggatga
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