Methylorubrum extorquens DM4: METDI1533
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Entry
METDI1533 CDS
T00947
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
METDI1533 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI1533 (recO)
DNA repair and recombination proteins [BR:
mdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
METDI1533 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
METDI1533 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
CAX23130
UniProt:
C7CGN0
LinkDB
All DBs
Position
1397321..1398061
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AA seq
246 aa
AA seq
DB search
MQWIDDGLVIGLRKHGETGVVLELMTPEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA
RLDGALGAYAVEPLTLNASRLMDSGLALYGVAHLSALLRLLPERDPHPALYEAAQILIAH
LDDPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR
DRLLPLPPFLRDRDQSGSGWRTPDTHDVREGFTLTGYFLDQHVWRPRAQDTPEERARFVA
LGTGQS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggatcgacgatggcctggtgatcggcctgcgcaagcacggcgagaccggggtc
gtgctcgaactgatgacgccggagcacgggcgccatctcgggctcgtccatggcgggcgc
tcgcggcggatgcagccgatgctccagcccggcaacacgcttcgcgcgacgtggcgggcg
cggctcgacggggcgctcggggcctacgcggtcgagccgctgaccctgaacgcctcgcgc
ctcatggattcgggtctcgcgctctacggtgtcgcgcatctctcggcgctgctgcggctc
ctgcccgagcgcgatccgcatccggcgctctacgaggcggcgcagatcctgatcgcccat
ctcgacgatcccgagatcgcccccgcgctgatggtgcggttcgaactggcgctgcttgcg
gggctcggctttggcctcgacctctcgcattgcgccgcgacgggcgccaacgacgccctg
gtctacgtctccccgaagagcgggcgcgcggtcagcgcctcggcgggcgagccttttcgc
gatcgcctgctgccgcttccacccttcctgcgcgaccgcgaccagtccggcagcggctgg
cgcacgcccgacacccacgacgttcgggaggggtttaccttgacggggtatttcctcgat
cagcatgtctggcgcccgcgggcgcaagacacgccggaggaacgcgcacgattcgtcgca
ctcggcactggccagagttga
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