Methylomonas denitrificans: JT25_022185
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Entry
JT25_022185 CDS
T04191
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mdn
Methylomonas denitrificans
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdn03016
]
JT25_022185
Enzymes [BR:
mdn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JT25_022185
Transfer RNA biogenesis [BR:
mdn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JT25_022185
Prokaryotic type
JT25_022185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AMK79157
UniProt:
A0A140E6Y3
LinkDB
All DBs
Position
complement(4838821..4839624)
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AA seq
267 aa
AA seq
DB search
MPRIVLGIEYDGSAYAGWQWQNGKATVQGQLEKALTRIANQPITVLCAGRTDAGVHALEQ
VVHFDCEVERDMHAWLMGGNSQLPDDIRITWAQAAQGDFHARYSAIARAYRYVILNRLMK
SALLRSQATWCYQKLDADAMHRAAQALLGEHDFSSFRAQSCQSVSPNRLMHFIDVYRDEQ
RVIIDLCANAFLHHMVRNIAGVLMEIGMGRRSVEWTSELLTIKDRSQAAMTAPPHGLHLA
AVYYPEHYGVAKNALFDKLPADARRYD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcattgttctaggtatcgaatacgacggcagcgcttacgccggctggcaatgg
caaaacggtaaagcgacggtgcagggccagctggaaaaagccttgactagaatcgccaat
caaccgattaccgtgctttgcgccggtcgtaccgatgccggcgtgcatgcgctggaacaa
gtggtgcatttcgattgcgaggtcgagcgcgatatgcacgcctggctgatgggcggcaac
agtcaattaccggacgatattcgtatcacttgggcgcaagcggcgcagggcgattttcat
gcgcgttacagcgccatcgcccgcgcttatcgatatgtgattttgaatcggctgatgaag
tctgcactattgcgcagccaagccacctggtgttaccaaaaactggatgccgacgctatg
caccgggcggcgcaagccctgcttggtgaacacgacttttcctcatttcgcgcgcaaagc
tgtcaatcggtcagccctaatcgcttgatgcattttatcgatgtatatcgagacgagcag
cgggtgatcatagatctatgtgccaatgcgtttctgcaccatatggtcagaaatatcgcc
ggggtgttgatggaaattggcatgggccggcgctcggtggagtggacatccgaattgcta
accattaaagaccgctcgcaagcggcgatgaccgcgccaccgcatggtttgcacctggcg
gccgtgtattacccggagcattacggcgtcgccaaaaatgcgctattcgacaaactaccg
gccgatgcaaggcgctacgattga
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