Methylophaga frappieri: Q7C_361
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Entry
Q7C_361 CDS
T02056
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mec
Methylophaga frappieri
Pathway
mec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q7C_361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mec03400
]
Q7C_361
DNA repair and recombination proteins [BR:
mec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q7C_361
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q7C_361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
UB2H
DUF6781
AAA_5
Microtub_bd
SRP54
SWI2_SNF2
IF2_N
DUF6559
Motif
Other DBs
NCBI-ProteinID:
AFJ01537
UniProt:
I1YF44
LinkDB
All DBs
Position
complement(355363..357375)
Genome browser
AA seq
670 aa
AA seq
DB search
MNKQFELVSEFKPAGDQPAAIASLVEGLNNGEMYQTLLGVTGSGKTFTMANVAQVLQRPV
MVLAPNKTLAAQLYSEMKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIDKDASVNEQIE
QMRLSATKAMLERRDAIIVSSVSCIYGLGEKDAYLSMVLHLVQGDVINQRDILRRLAELQ
YTRNDIELARGTYRVRGEVIDIFPAESERDAVRIELFDDEVEQISYFDPLTGEMIQRLSR
ITIYPKTHYVTPRENLLKAIDAIKIEMADRLKQLTDDNKLVEAQRLEQRTRFDLEMLLEL
GYCNGIENYSRHLSGRDPGAAPPTLFDYLPDDAILIIDESHVMIPQIGAMYKGDRSRKQT
LVDYGFRLPSALDNRPLMFEEWERLAPQTVFVSATPGKYEDAHAGNVVEQVVRPTGLVDP
EVEIRPVATQVDDLLSEIKRRSEINERVLVTTLTKRMAEDLTDYFREHNVKVRYLHSDID
TVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSDRSLIQTIGR
AARNLNGKAILYADEITGSMQRAIEETERRREKQIAHNEAHGITPVGIVKSIRGGMDDPK
AAQAEKLTLSKVAEEQAKYASLTPKQLAKRIQQIENAMYKHAQNLEFEQAAKLRDELEQV
RKLALGPVAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaatttgaactggtcagtgaatttaaacccgccggtgatcagccggcagct
atcgcttcattggtcgagggtttgaataatggcgaaatgtatcaaaccctgttaggggta
accggttcgggcaaaacctttaccatggccaatgtcgcgcaggtattacagcgccccgtg
atggtgttggcaccgaataaaacgctggcagcgcagctttatagtgagatgaaagagttt
tttccaaacaatgcggtggaatatttcgtttcttactacgattactatcaaccggaagct
tatgtgccgtcgtctgacacttttatcgataaggatgcctcagtaaacgaacaaatagag
caaatgcgattgtcggcgaccaaagccatgttggaacgacgtgatgccattatcgtatcc
agcgtttcctgtatttatggtctgggcgaaaaagacgcttatctgtcgatggtgctgcac
ctggttcaaggggatgttattaatcagcgcgatattttaaggcgccttgccgagttgcaa
tatacgcgcaacgatattgaactggcgcgcggtacttatcgggttcgtggtgaagtgatt
gatatttttccggcagagtcagagcgagatgcggtacgtattgaactgtttgatgatgaa
gttgaacaaatcagttatttcgacccgctgaccggcgaaatgatacagcggcttagccgc
atcaccatctatccgaaaacccactatgtcacgccccgggaaaacctgctaaaagccatt
gacgccatcaaaatagaaatggcggatagactaaagcaacttactgatgacaataagctg
gtcgaagcacagcgtcttgagcagcgaacacgtttcgatttggaaatgttgctcgaactt
ggttattgcaatggtattgaaaattattcccggcatttatccggacgagatcctggcgcc
gcaccaccgaccttatttgattatttgccggatgatgcgattttaattattgatgaaagc
cacgtcatgattccgcagattggcgcgatgtataagggcgatcgatcacgcaaacaaacg
ttagtggactatggctttcgtctgccatcggcattggataatcgaccgttaatgtttgaa
gagtgggaacggttggcaccgcaaacggtttttgtttcggcaacacccggcaagtatgaa
gacgcgcatgccggaaatgtggtggaacaagttgtcagaccgactgggctggtggatcca
gaggttgaaatacgccctgtcgcgacgcaggtagatgacctgttgtccgagattaagcgt
cgaagtgagataaacgagcgtgttttggtaaccaccttgaccaagcggatggctgaagat
ctgaccgactatttccgcgagcataatgtaaaagtacgctacctgcattctgatatagat
accgttgagcgcgttgaaataatccgtgatttgcggctgggtgagtttgatgtgctggtc
ggaatcaacttgttgcgggaaggcctggatattccagaagtgtcactagtggctatttta
gatgcggacaaagaagggtttctccgcagtgatcgctctttaattcagaccattggtcgt
gcggcacgaaacctgaatggtaaagcgattctgtatgcggatgaaataaccggttcgatg
cagcgggcaattgaagaaaccgagcgtcgccgcgaaaaacaaatcgcgcataatgaagcc
catggcatcacaccggtcggtatcgtgaaatcgattcgaggtggcatggatgatccaaaa
gcagcgcaggcagaaaagctgactttgagcaaagtggcagaagaacaggcgaaatacgct
agtcttaccccaaaacagctggcaaaacggattcagcaaattgaaaatgccatgtacaaa
catgctcagaatcttgagtttgaacaagcagcaaaactccgagatgagctggaacaggta
cgaaaattagcattgggccctgttgccgtttaa
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