Methylovorus glucosetrophus: Msip34_0388
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Entry
Msip34_0388 CDS
T00943
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mei
Methylovorus glucosetrophus
Pathway
mei03030
DNA replication
mei03410
Base excision repair
mei03420
Nucleotide excision repair
mei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Msip34_0388
03410 Base excision repair
Msip34_0388
03420 Nucleotide excision repair
Msip34_0388
03440 Homologous recombination
Msip34_0388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mei03032
]
Msip34_0388
03400 DNA repair and recombination proteins [BR:
mei03400
]
Msip34_0388
Enzymes [BR:
mei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Msip34_0388
DNA replication proteins [BR:
mei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Msip34_0388
DNA repair and recombination proteins [BR:
mei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Msip34_0388
NER (nucleotide excision repair)
GGR (global genome repair) factors
Msip34_0388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACT49636
UniProt:
C6X916
LinkDB
All DBs
Position
complement(396836..399592)
Genome browser
AA seq
918 aa
AA seq
DB search
MKTLLLVDGSSYLYRAFHAMPDLRNKQNEPTGAIQGVLNMLRRLHKDYPADYSACVFDAK
GKTFRDDIYPEYKANRASMPDDLRLQIEPLHTAIQAMGWPLIVEDGVEADDVIGALAKQA
EREGMRVIISTGDKDISQLVNEHITVVNTMRDAFRKTDEVLDPAGVEAKFGVPPSLMVDY
LILIGDSSDNVPGVEKVGPKTAVKWLTQYGSLENIIAHADQITGVVGENLRKALPWLPTA
RELITIRCDVGIQESLEDLAPRPQDREKLIELFDRFEFKTLRRELDLAVPAAQAPLPAMA
AQPAGTSADLFAAAGVTTRQFETILDEASLQRWLDKISSAALVCFDTETTSLDPLTAKLV
GMSFSIKAGEAAYLPLTHDYPGAPDQLPFAATLARIKPLLENPAIKKVGQNLKYDKHVLA
NHGIALNGIAHDTLLQSYVLESHRTHGMDDLAMRHLGVQTITYEQVAGKGAKQVSFSQVA
LEQASEYAAEDADVTLQLHENLYPQVAEDAKLEFVYRQIEMPVLDILFTIERNGVLIDND
MLNRQSHEIGQKLMALEQQAYELAGQPFNLGSPKQLQEILFGKLGIKPLKKTPSGTPSTD
EDVLQELALDYPLPKVLLEYRGLAKLKSTYTDKLPRMINPTTGRVHTSYSQAVAVTGRLS
SSDPNLQNIPVRTAEGRRIREAFVAPAGGHIVSADYSQIELRIMAHLSQDDGLLTAFAAG
EDIHRATAAEIFGVERDAVSSEQRRYAKVINFGLIYGMSAFGLAQNLGIERQAAQNYIER
YFTRYPGVRDYMQNTRERAKAQGYVETFFGRRLWVPEINSPNGMRRAGAERAAINAPMQG
TAADLIKLAMIAVQGWLESEKLATKLIMQVHDELVLEVPDNELALVKEKLPQLMQDVAKL
DVPLLAEVGVGSNWEAAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattgttattggttgacggctcatcctatctttaccgggcgtttcatgccatg
cccgatttacgcaacaagcaaaacgagccgaccggcgctattcagggcgtgctcaacatg
ctgcgccgcctgcataaagattatccggccgattatagcgcttgtgtgtttgatgccaaa
ggcaaaacctttcgtgatgacatctaccccgaatacaaggccaatcgcgcctccatgccc
gacgatctgcgcctgcagatagagccattgcacaccgccattcaggccatgggctggccg
ctgattgtggaagacggagtggaagccgatgacgttatcggcgcgctggcgaagcaggcc
gagcgcgagggcatgcgcgtcatcatttccactggcgacaaggatatttcgcagctggtg
aatgagcacatcaccgtcgtcaataccatgcgcgatgccttccgcaaaaccgatgaagtg
ctggacccggcaggcgtggaagccaaatttggcgtgccgcccagcctgatggtcgactac
ctgatattgatcggcgacagctcggacaatgtccccggcgtggaaaaagtcggcccgaaa
accgccgtcaaatggctcacgcaatatggctcgctggaaaatatcatcgcgcatgccgac
cagattaccggcgtagtgggcgaaaatctgcgcaaggccctgccttggctgccaacggcg
cgcgagctgatcaccatccgctgcgatgtgggcatacaggagagcctggaggatctggca
ccacgcccgcaggaccgcgaaaagctgattgagctgtttgaccgttttgaattcaagacc
ctgcgccgcgagctggaccttgcagttcccgccgcgcaagcaccgctgcctgccatggcg
gcacagccagcaggcacctcggcagatctgtttgccgccgctggcgtcactacccgccag
tttgagaccatcctcgatgaagccagcctgcaacgctggctggacaagatcagcagcgcc
gcactggtgtgctttgataccgaaaccacctcgctggacccgctgaccgccaagctggtc
ggcatgtcgttttcgatcaaggcgggcgaagctgcttatctgccactgacgcatgattac
cccggcgcaccggatcagctgccatttgccgccacattggcacgcatcaagccgctgctg
gaaaaccccgccatcaaaaaagtcgggcaaaacctcaaatacgacaagcacgtgctggcc
aaccacggcattgcgctcaatggcattgcgcacgacaccctgctgcaatcttacgtgttg
gaaagccatcgcacccatggcatggatgatctcgccatgcgccacctcggtgtgcagacc
atcacctatgaacaagtcgcaggcaaaggcgccaagcaggtgtctttcagccaggtggcc
ctggagcaggccagcgaatacgccgccgaagatgccgatgtcaccctgcaactgcatgaa
aatctctatccgcaggtagcggaagatgccaagctggaattcgtctatcgccagatcgag
atgccggtgctggatatcctgttcaccatcgagcgcaatggcgtgctgatcgacaatgac
atgctgaatcgccagagccatgaaatcggccagaagctgatggcgctggagcaacaggct
tacgagttggccggtcagccattcaacctgggctcgcccaagcaattgcaggaaatcctg
ttcggcaagttgggcatcaagcccctgaagaaaacccccagcggtacgccttctaccgat
gaagacgtgctgcaggagctggcgctggattaccccttgcccaaggtcttgctggaatat
cgcggcctcgccaagctgaaatccacctacaccgacaagctgccgcgcatgatcaacccg
accaccggccgcgtgcacaccagctacagtcaggccgtggcggtgaccggtcgcctctcc
agctcggaccccaatctgcagaatattccggtacgcaccgccgaaggccgccgcatccgc
gaggcctttgtggcgcctgcgggtggccacatcgtctcggctgactattcccagatcgag
ctgcgcatcatggcgcacttgtcacaggatgatggcctgctcaccgcctttgccgcaggt
gaggatattcaccgcgccaccgcggcggaaatctttggcgtagagcgcgacgccgtcagc
agcgagcagcgccgttatgccaaagtcatcaacttcggcctgatctacggcatgagcgcc
ttcggcctcgcgcaaaacctcggcatcgaacgccaggccgcgcagaactacatcgagcgc
tatttcacccgctaccccggcgtgcgcgattacatgcaaaacacgcgcgagcgcgccaaa
gcccagggctatgtggaaaccttcttcggccgtcgcctgtgggtacccgagatcaacagc
cccaacggcatgcgccgcgcaggcgccgagcgcgccgccatcaacgcccccatgcaaggc
accgcagccgacctcatcaagctcgccatgatagccgtgcaaggctggctggaaagcgaa
aagctcgccaccaaactcatcatgcaagtgcacgatgaactggtgctggaagtgccggat
aacgagctggcgctggtgaaggaaaaactgccgcagctgatgcaggatgtggcaaaactg
gatgtgccattgctggcagaagtcggggtggggagtaactgggaagcagcgcactga
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