Methylophaga nitratireducenticrescens: Q7A_982
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Entry
Q7A_982 CDS
T02055
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mej
Methylophaga nitratireducenticrescens
Brite
KEGG Orthology (KO) [BR:
mej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mej03016
]
Q7A_982 (rnd)
Enzymes [BR:
mej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Q7A_982 (rnd)
Transfer RNA biogenesis [BR:
mej03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Q7A_982 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AFI83824
UniProt:
I1XHF5
LinkDB
All DBs
Position
complement(989976..991124)
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AA seq
382 aa
AA seq
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MTVLYIDSDTALTQFCSEIQHSKWLAIDTEFLREKTYYPQLCLIQIANDDIIACVDPIAI
KDLTPLLNLLYQPDITLVFHAARQDLELLYLLKNSLPPNLFDTQLAATILGDGDQIGYGN
LVKQRLDVSLDKAHSRADWTQRPLSPEQLEYAADDVRYLCELYHQMSADLEKQQRTEWLK
EDFAALSNADNYVADPETIWRKIRGAGKLKGVQLAVLQQLAAWREQRAMDRDRPRRWILK
DEVMLDLARFAPEKPEKLSQIRGLEARDIERSGRAIIDVISKAKQTPPEQWPILLKPEPL
SNQQEALIDALMALLRKFCDEQSITPIAVASRKDIEKLVRGEKDLALLQGWRYQIVGHHL
TDFISGHLSVTADTQQIHTKEV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgactgttctttacattgattcggatacggcgttaacacaattttgctcggaaattcaa
cacagcaaatggctggcaattgacacggaattccttcgcgaaaaaacctattacccccag
ttgtgcctgatccagattgccaatgacgatatcattgcctgtgttgatccgatcgctata
aaagatctcactcctttgctgaatttactctatcaaccggacataacactggttttccat
gctgcacgacaggatctggaactgctatatctgttaaaaaattcccttccgccaaatttg
tttgatacccagttagctgcaaccatcctcggtgacggtgatcaaattggctatggcaac
ctggtgaaacaacgtcttgatgtcagccttgataaagcccattccagagccgactggaca
cagcgaccgttaagtcccgaacaattggaatatgcagcagatgatgtacgttatctgtgt
gagctttatcatcaaatgtctgctgatctggaaaaacaacagcgtacggaatggcttaaa
gaagattttgccgccctgtccaatgccgataattacgttgctgatcctgaaaccatctgg
cgtaaaatccgtggggcaggtaaattaaaaggtgtgcaactggccgtattacagcaactg
gcagcatggcgtgaacagcgcgcgatggatcgggatcgtccaaggcgttggattctcaaa
gatgaagtaatgctggatctggcacgatttgccccggaaaaacccgaaaaactcagtcaa
atccgcgggcttgaggcgcgggatattgaacgcagtggtcgggccattattgacgttatc
agcaaagccaaacaaacgccgcccgaacaatggccgatattgctcaaacccgagccactg
agtaatcagcaggaagctctgattgatgcgttgatggcattactacgtaaattctgtgat
gagcaatcaattactcctattgccgtggccagccgtaaagacattgaaaagctggtacgc
ggagaaaaagatcttgctttattacagggctggcgatatcaaatcgtcggtcatcacctg
actgattttatcagtggtcacctgtcagtcactgctgatacacaacagattcatacaaaa
gaggtatag
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