Methanobacterium lacus: Metbo_1143
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Entry
Metbo_1143 CDS
T01437
Name
(GenBank) UvrABC system protein C
KO
K03703
excinuclease ABC subunit C
Organism
mel
Methanobacterium lacus
Pathway
mel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Metbo_1143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mel03400
]
Metbo_1143
DNA repair and recombination proteins [BR:
mel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Metbo_1143
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
HHH_2
GIY-YIG
UVR
HHH
5_3_exonuc
HHH_3
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
ADZ09387
UniProt:
F0T5Z4
LinkDB
All DBs
Position
1147370..1149142
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AA seq
590 aa
AA seq
DB search
MVIKSNDPDDLPLVPGVYLLKDSADRILYVGKAKSLKKRVKSYFRSDLDPKTRALMNQFH
HLEYIVTDTEKEALILESNLIKKHMPRYNIRLKDDKRYPYIRVTNEKFPRVIITRRVLDD
GSYYYGPFTEATTLRRLVKFIKALFKVRDCKNMDGPCLNYQIDLCRAPCDNKISEAEYKR
MVDNVSMFFEGKYDQIMDALKEEMMDAAENHEFEKAAVLRDQINSVEDVLEKQKMEFTGD
LDQDVIASASDEELACVAVFSVRNGKIIGREDFLMGGGENSSEEKIVTAFLKQYYMGPRH
VPSKIILHKDIEDRKLIEEWLSEKREANVGIEVPVEGIEFRLAKMVSKNAQILLNHQKEV
KGALVDLKKYLGIAKIPKRIEAYDISNISGQNAVGSMVVFEDGTPKKSAYRRYKIETEGP
DDYAMMKEMLTRRFTNLINNQDSEPDLVLVDGGKGQLNIALEVFYSLNINYPVIGLAKEF
EHVFIPQTPSPLILPRNSEALLLLQRIRDEAHRFAITYHKQLRSKEFKSSPLDKIPGVGN
KRRMLLLKHFGSMENIMNADLDELQQVKGISKKLANIIHDHFDSLNIKKE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
ttggttataaaaagcaacgatccggatgatcttccgttggttcctggagtatatttgtta
aaagattctgcagatagaatactctatgttggaaaggcaaaatcccttaaaaaaagagtt
aaatcctattttagatcagatcttgatcccaagacaagggccctaatgaaccagttccat
catttagagtacattgtaacggacacagaaaaggaggccttgatacttgaatctaacctc
ataaaaaaacacatgccccgttacaacatacggcttaaggatgataagagatacccatac
atcagggttaccaacgaaaaatttccacgtgtcataatcaccagaagagtgcttgatgat
ggatcatattactacggaccatttacagaagcaacaacccttcgaagacttgtaaaattt
attaaagcattgttcaaagtaagggactgtaaaaacatggatgggccgtgtttaaactat
caaatagatctttgcagagcaccttgcgacaacaagataagcgaagctgaatacaaaaga
atggttgataatgtatccatgttctttgagggtaaatacgatcaaattatggatgcactt
aaagaggaaatgatggatgccgctgaaaaccatgaatttgaaaaggccgcagttttaagg
gatcaaataaactcggtggaagatgtgctggaaaaacagaagatggaattcactggagat
ctggatcaggatgttattgcatctgcttctgatgaagaattggcatgtgtagcagttttt
tccgtgagaaacggcaagatcataggaagggaagatttcttaatgggcggaggagaaaac
agttccgaagaaaaaattgtgacggccttcctaaaacagtactacatgggcccccgacat
gttccttctaagataatactgcacaaagacattgaagacagaaaactcattgaagaatgg
ttatcagaaaaaagagaagcaaatgtgggtattgaagtgccagttgaaggcattgaattt
aggctggctaaaatggtgtctaaaaatgctcaaatacttttaaaccatcaaaaagaggtt
aaaggtgctcttgtggatctcaagaagtacttaggaatagctaaaatacccaaacgcata
gaagcatatgatatatcaaatataagtggacaaaatgcagtgggatccatggttgtcttt
gaagatggaacacctaaaaaaagtgcatacagacgatataaaattgaaaccgaaggtccc
gatgattacgccatgatgaaggaaatgttaactcggagattcacaaacctcataaacaat
caggattctgaaccagatcttgtgctggtagatggtggtaagggacagttaaacattgct
cttgaagttttttattcattaaatataaattatcctgtaataggacttgctaaagaattt
gagcatgtttttattcctcaaacacccagtcctctaattctgcccaggaactctgaagcc
ttgcttttacttcaaagaataagggatgaagcccataggtttgctattacttatcacaaa
cagctacgatcaaaggaatttaaaagttcacccctcgataaaattccaggtgtcggtaac
aaacgaaggatgttactgcttaaacattttggaagcatggaaaatatcatgaatgcagat
ctggatgaacttcaacaagtaaagggcatcagtaaaaaactagctaacattatccatgat
cacttcgatagcttaaacatcaagaaagaataa
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