Methanobacterium alkalithermotolerans: HYG87_00375
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Entry
HYG87_00375 CDS
T07794
Name
(GenBank) DNA-binding protein
KO
K10979
DNA end-binding protein Ku
Organism
meme
Methanobacterium alkalithermotolerans
Pathway
meme03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
meme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HYG87_00375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meme03400
]
HYG87_00375
DNA repair and recombination proteins [BR:
meme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HYG87_00375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QUH22328
UniProt:
A0A8T8K1R6
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All DBs
Position
complement(67337..68101)
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AA seq
254 aa
AA seq
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MRSIWSGYLTFGSILIPIRTYSASGPLHIGFHQVHKIDCGRVRYKKVCEKDGKELKRDEI
SKAFFIAGECLKFSDEEIESLRPFANKIMEIQGFCKMEEIPLLGLGKPYYIGTQSPQKGG
VGQSFLLLKKALEKTEKVAVVKWVSRSNEYIGMLKPEENGFLLKQLLYKEQVRSSQEIEI
IEADLPKDLLEKGVQVVEKMSFDFDWGSYQEEYTSQVKELIEKKARGEEIPREEIKLPET
RSIEAELERMLLEE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccatatggtctggatatctaacttttggaagtattttaattcccatacgtact
tattctgccagcgggcccctgcacattggttttcatcaggtgcataaaatagactgtggt
cgggtgcggtataaaaaggtctgtgaaaaggatgggaaggaattaaaaagagatgaaata
tctaaagctttttttattgccggtgaatgtttaaagttctctgatgaggaaatagaatcc
ctccgaccatttgccaataaaataatggaaatacagggattttgtaaaatggaagaaata
cctcttctgggcctgggaaaaccctattacattggtacccagtcacctcaaaaaggagga
gtgggacaaagttttcttttacttaaaaaagctctggaaaaaacagaaaaagtggcggtg
gttaagtgggtttcccggagcaatgaatatattggaatgttaaaaccagaagaaaatggc
tttctcttaaaacagctcctctataaagaacaggtacgatcctcacaagaaatagaaata
atagaagcagacctccccaaagatctcctggaaaaaggagtgcaggtggtagagaagatg
agttttgattttgattggggtagttaccaggaggaatacacttcccaggtaaaagaactg
atagaaaaaaaggccaggggtgaagaaataccccgagaagaaatcaaattaccggaaact
cgttccattgaagcggagctggaaagaatgctccttgaagagtaa
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