Candidatus Moranella endobia PCVAL: MPC_193
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Entry
MPC_193 CDS
T02613
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
meo
Candidatus Moranella endobia PCVAL
Pathway
meo03410
Base excision repair
meo03430
Mismatch repair
meo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MPC_193 (recJ)
03430 Mismatch repair
MPC_193 (recJ)
03440 Homologous recombination
MPC_193 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meo03400
]
MPC_193 (recJ)
DNA repair and recombination proteins [BR:
meo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MPC_193 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MPC_193 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MPC_193 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AGJ61233
LinkDB
All DBs
Position
224623..226362
Genome browser
AA seq
579 aa
AA seq
DB search
MTTKLQRRPLGDIAVLAEADIPQLLKRLYVQRGVCTMSELENSTRGLLPYHQLTGIEQAV
DILVRALVNQRRMMVIGDCDADGATSTALAVLALRQMGARQVDFLVPNRFADGYGLSPAV
VEQAAACGAQVIITVDNGIASHDGVALAHNKGIMVLITDHHIPGDRLPAAHAIVNPNLRG
CAFASKALAGVGVAFYLMLALRAQLNDSGWFTKLRIVAPNMADLLDLVALGTVADMVPLD
ANNRILIHQGLNRIRAGRCRPGIRALAEVANLAPTQRLCASNLSFSLGPRLNAAGRLADM
SVGVNLLLVDDLSLACILATELDELNQTRRDIEHRMEAEAVALCNKMMTCDEQQVLPFGL
VIYHAQWHQGVVGILASRMKARFHRPVIAFAPAGDGVLKGSGRSVAGLHMLDMLERLNKL
HPGLILQFGGHAMSAGLTLKQQQLNRFRQHFADMVDQLLEPAMLENVIWSDGELSSLDLS
LTTAELLRNGGPWGHAFPDPIFDGRFNVLNQRLVGGKHLKLLLTPQAGGPTLDGMAFNVD
TCLWPNNNVQTVEIAYQLDVNEFRGNRRLQLLIQHIWQL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacaactaaattacaacggcgtccactgggcgatattgctgtgctggctgaggcagat
ataccacagttgttgaaacgcttgtacgtgcaacgcggagtttgcacaatgagtgaatta
gagaatagcacacgcggtttgttaccataccaccaacttacgggcatcgagcaagcggta
gatattctggtcagagcgctggttaaccagcgcagaatgatggtgattggtgattgcgat
gcggacggggctactagcacggcgctagcagtactagcgctgcggcaaatgggtgcgcgg
caggtggactttctggtgccaaatcgctttgctgacggctacggtctcagcccagctgtg
gtagaacaagcggcggcgtgcggggcgcaggtaattattaccgtggataatggtattgct
tcccatgacggcgtagccttagcacataacaaagggattatggtgctgattactgatcat
cacatccctggcgatcgcctgccagccgcacatgctattgttaatcccaatttgcgcggc
tgcgccttcgcatcgaaagccctagctggtgttggtgtagcattttatttgatgctggcg
ctgcgcgcgcagctcaatgatagtggttggtttactaaacttagaatcgttgccccaaat
atggccgatctactagatttagtcgcattgggcacagtggctgatatggtgccactggac
gccaataaccgtattctgatacatcaggggctaaaccgcatccgtgctggccgttgccgt
cccggcattcgcgcgctggctgaggtagccaaccttgctcctacccagcggctatgtgcc
agcaatcttagcttctcgctgggaccgcggctaaacgctgccggccggctggccgatatg
tcggttggagttaatctgctattggtcgatgacctgtcgctggcgtgcattctggccact
gagttagatgaactaaatcagaccaggcgtgacatcgaacatagaatggaagcagaagcc
gtggcgctatgtaacaagatgatgacgtgcgatgagcagcaggtattaccatttggactg
gtaatctaccatgcgcagtggcatcagggcgtggtgggtatattagcatcgcggatgaaa
gcacgttttcaccggccggttattgcttttgcgcccgccggggacggtgtgctaaaaggt
tctggtagatcggttgccggcttgcatatgctagatatgctagagcggctaaacaaatta
catcctgggttgatactacaatttggtggccatgccatgtccgccggcttaacgctgaag
cagcaacaattgaacaggttccgacagcatttcgctgacatggttgatcaattgctagag
ccagcgatgctggaaaacgtgatttggtcggacggtgagctatcaagcttggatctatct
ttgaccaccgcagagctactgcgcaacggcggcccctggggacatgcatttcccgatcca
atatttgacgggaggtttaacgtgctaaatcagcggctagtgggtggaaaacacctaaaa
ttgctgctgacaccccaagccggcggccccacactggatggaatggcttttaatgtcgat
acgtgcctgtggccaaataacaacgtgcaaaccgtggaaatagcttatcaacttgacgtg
aatgagtttcgcggtaatcgacgtttacaactattaatccagcatatttggcagctgtag
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