Manihot esculenta (cassava): 110621651
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Entry
110621651 CDS
T05761
Name
(RefSeq) nuclear transcription factor Y subunit B-6
KO
K08065
nuclear transcription Y subunit beta
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110621651
Transcription factors [BR:
mesc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
110621651
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
Bromo_TP
CENP-T_C
DUF4548
TAF
Motif
Other DBs
NCBI-GeneID:
110621651
NCBI-ProteinID:
XP_021621612
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All DBs
Position
8:complement(10860673..10862367)
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AA seq
218 aa
AA seq
DB search
MERAGFHGYRKLPSTSSGPKLSEMNMRLEEMNHGNSNNTTTNHSTADDNECTVREQDRFM
PIANVIRIMRKILPSHAKISDDAKETIQECVSEYISFITSEANERCQREQRKTITAEDVL
YAMSKLGFDDYIEPLTVYLHRYRELEGDRASIRGEPLVKRSVEYGNLGVPAGAFAPAFHM
GHHGFFGTAAMGGYMRDPSNASSSQNALANGEAFPQNK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtgcaggcttccatggctaccgcaagctaccaagcacaagctctgggccgaag
ctatctgaaatgaacatgaggctggaagagatgaatcatggaaatagcaacaacactact
actaatcactccacggcagatgacaatgaatgcacagtgagggagcaagacagattcatg
ccaatcgcaaatgttatcaggatcatgcgcaagatacttccttcacatgccaaaatctcc
gatgatgccaaggaaaccatccaagagtgtgtttccgagtacatcagcttcatcactagc
gaagccaatgaacgctgccaacgcgagcagcgcaagaccattactgctgaagatgttctt
tatgctatgagcaagctaggctttgatgattacattgaacccttgactgtgtatctccat
cgttaccgtgaactcgagggtgaccgtgcctcgataagaggcgagccattggtgaagagg
agtgttgaatatggtaacttgggggttccagctggtgcctttgcaccagcatttcacatg
ggtcaccatggattctttggcacggctgccatgggaggatatatgagggatccttccaat
gctagttcctcccaaaatgcactggctaatggtgaagcatttccccagaataaatga
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