Manihot esculenta (cassava): 110625516
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Entry
110625516 CDS
T05761
Name
(RefSeq) beta-galactosidase 17 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00052
Galactose metabolism
mesc00511
Other glycan degradation
mesc00531
Glycosaminoglycan degradation
mesc00600
Sphingolipid metabolism
mesc00604
Glycosphingolipid biosynthesis - ganglio series
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
110625516
09103 Lipid metabolism
00600 Sphingolipid metabolism
110625516
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
110625516
00604 Glycosphingolipid biosynthesis - ganglio series
110625516
00511 Other glycan degradation
110625516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110625516
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
110625516
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110625516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_gal-bd
BetaGal_ABD_1
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
110625516
NCBI-ProteinID:
XP_021626828
LinkDB
All DBs
Position
11:2555461..2565604
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AA seq
714 aa
AA seq
DB search
MIRPNSASNLSSKFTITMARKGGPKITLFLLFISIIAFGVFVPVFAPLPSLSSSSHSHRH
RKVFTANARSFEIADDVFWKDGKPFRIIGGDLHYFRILPEYWEDRLLRAKALGLNTIQTY
VPWNLHEPQPGNLVFEGIADLVSFLKICQKLDFLVMLRAGPYICAEWDLGGFPAWLLAIE
PALKLRSSDPAYLKLVDKWWGILLPKVAHLLYNNGGPIIMVQIENEFGSYGDDQSYLHHL
VKLAREHLGENIVLYTTDGGTRETLEKGTIRGDAVFSAVDFSTGEDPSPIFKLQKEFNAP
GKSPPLSAEFYTGWLTHWGEDLQHTGAGFTASALEKIFSQNGSAVLYMAHGGTNFGFYNG
ANTIADESGYTYKPDITSYDYDAPIKESGDVDNAKFRALKRVIGRHSVASLPSTPPDNEK
TGYGPIRLQKTAFLFDLLDMINPADVVESRNPVSMESVGQVFNMFGFLVYVSEYASKDDG
NILFIPKVHDRAQVFVLCSSDDKERRPTYIGTIERWSNEKLLLPNTKCASNISLIVLVEN
MGRVNYGQYMFDRKGILSSVYLDGRILDGWKMITIPLHTLNEVPRTNLITLVAHSRIVTS
SALRKLEDSERVSKEPALYTAHFSIEKDNQVKDTFISFSGWGKGIAFVNDFNIGRYWPSF
GPQCTLYVPAPILHRGENVLVILELESHHPELVVNSVDQPDFTCGSSKSNVHQL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacctaacagtgcttctaatctaagctccaaattcactataacaatggcgaga
aagggaggccccaaaatcacgctgtttcttcttttcatctcaatcatagcatttggagtg
ttcgttccagtcttcgctcctctcccttctctctcctcttcctctcactctcatcgtcac
aggaaggtcttcacagctaatgctcgaagctttgagatagcggatgacgtgttctggaag
gatggtaaacctttccggatcattggtggtgatctgcactactttcgaatacttcctgag
tattgggaagataggcttttgagagcaaaggctctgggtttgaataccatccaaacttat
gttccttggaatctacatgaaccacaacctggcaacttggtcttcgagggtattgctgat
ctagtttcttttctcaaaatctgccaaaagctggatttccttgttatgcttcgagctggg
ccttatatttgtgcagaatgggatttaggaggtttccctgcctggttattagccatagag
cctgctctcaaattgagatcatccgaccctgcatatcttaaattggtagacaaatggtgg
ggaatcctactaccaaaggtagctcatcttctttataacaatggaggtcctattataatg
gttcagattgaaaatgaatttggttcatatggggatgaccagtcttatcttcatcaccta
gtcaaattggctcgagaacatcttggggagaacatagttctgtatactacagatggagga
actagggaaactcttgagaaaggaacaattcgtggagatgctgtcttttccgcggttgat
ttctccactggtgaggatccctcacctatattcaagttacagaaggaattcaatgcccca
gggaaatcaccaccactttctgcggaattctatacaggttggctgacacactggggagag
gatcttcagcatacaggtgctgggtttacagcgtctgccttggaaaagattttctcacaa
aatggttcagctgtgctttatatggcacacggtggaacaaattttggattttataatgga
gcaaataccattgctgacgagtctggttacacttacaagcctgatatcacttcctatgat
tatgatgcaccaattaaggaatctggtgatgtggataacgcaaaatttagagcactgaag
agggttatcgggcgtcatagtgtggcatcacttccctcaactcctcctgataatgaaaag
acaggatatggacctattcggttacagaaaacagcatttttatttgatttacttgatatg
attaatcctgctgatgtggttgaatccagaaacccagtctcaatggagtcagtgggacag
gtttttaacatgtttggatttctagtttatgtttctgaatatgcttcaaaggatgatgga
aacattttgttcataccaaaggtgcatgatagagctcaagtgtttgtattatgctcttct
gatgataaggagaggaggccaacatatattggtacaattgaaaggtggtcaaatgaaaaa
ctgctccttcctaataccaaatgtgcctctaacatcagcttaatagttttggttgaaaac
atgggccgtgtaaattatggacagtacatgtttgataggaagggaattttgtcttctgtt
tatctggatggaagaattttggatggatggaaaatgattacaattcctcttcacacccta
aatgaggtgccaagaactaatcttattactctggttgcacattccagaatcgttacatca
tcagccctcagaaaattagaagactctgagagggtttctaaagaaccagcattatatacg
gcccacttttctatagagaaagacaaccaagttaaggatacattcatatcattcagcggc
tggggtaaaggaattgcatttgtaaatgattttaacattggaagatactggccgtctttt
gggccacagtgcaccctctatgtccctgctccaatccttcaccgtggagaaaatgttctg
gtcatacttgagttagaatcacatcaccctgagcttgtggtaaattcagttgatcagcca
gacttcacgtgtggttcaagtaaatcgaatgtgcatcagctttag
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