Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2: EJ066_20415
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Entry
EJ066_20415 CDS
T05904
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mesm
Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2
Brite
KEGG Orthology (KO) [BR:
mesm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesm03016
]
EJ066_20415 (rnd)
Enzymes [BR:
mesm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EJ066_20415 (rnd)
Transfer RNA biogenesis [BR:
mesm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EJ066_20415 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AZN99297
UniProt:
A0A3S9BKI8
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All DBs
Position
complement(4254382..4255533)
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AA seq
383 aa
AA seq
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MHVITTQEELETALAAFEKSDFVTVDTEFIRETTFWPILCLIQMAAPGVTALIDPLSPDI
DLKPFFRLMANEAVIKVFHAARQDIEIIVHLGDLVPHPVFDTQVAAMVCGFGDSVSYDQL
VQKITGARLDKSSRFTDWRHRPLSDKQLDYALADVTHLIEVYQQLSAELKRENRAHWLNE
EMEVLTSRATYDPHPEDAWKRLKMRLRKPQELAIVQAVAAWREREARERDVPRGRVLKDD
AIYEVAQQSPRDAAALGKLRTTPKGWERSATATALLGAVNAALALPREDMPKLPKTFQPP
EGSNAAAELLKVLLRIVAEKEGVASKVLATSDDIDRIAAEGEAADVPALQGWRRAVFGEA
ALKLVRGEIAIKFDKRKIAVFDL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcatcaccacccaggaagaactcgagaccgctcttgccgcgttcgaaaagtcg
gatttcgtcaccgtcgacaccgaattcattcgcgagacgaccttttggccgatcctgtgc
ctgatccagatggcggcgcccggcgtgacggcgctgatcgatccgctgtcgcccgatatc
gacctgaagccgttcttcaggctgatggccaacgaggccgtcatcaaggtcttccatgcg
gcgcgccaggacatcgaaatcatcgtccatctcggcgatctggtcccgcatccggtgttc
gacacccaggtggcagcgatggtctgcggcttcggcgacagcgtctcctatgaccagctc
gtccagaagatcaccggcgcccggctcgacaagtcctcgcgtttcaccgactggcgccac
cggccgctgtccgacaagcagctcgattacgcgcttgccgacgtcacccatctgatcgag
gtctatcagcagctcagcgccgagcttaagcgggaaaaccgcgcccactggctgaacgag
gagatggaggtgctgacctcccgcgcgacctacgacccgcatccggaggacgcctggaag
cggctgaagatgcggctgcgcaagccgcaggagctggcgatcgtgcaagcggtggcggca
tggcgcgagcgcgaggcgcgcgaacgcgacgtgccgcgcggccgggtgctcaaggacgac
gccatctacgaggtggcgcagcagtcgccgcgcgatgcggcagcgctcggcaagctgcgc
accacgccgaaaggctgggaacgttcggcgacggcaacggcgctgctcggcgcggtcaac
gccgcgcttgccttgcccagggaagacatgccgaagctgccgaagacttttcagccgccc
gaaggctccaatgccgccgcggaactgctgaaagtgctgttgcggatcgtcgccgaaaag
gagggcgtcgcctcgaaggtgctggcgacgagcgacgacatcgaccgcatcgccgccgag
ggcgaagccgccgacgtgccggccttgcaaggctggcggcgcgccgtgttcggcgaggcc
gcgctcaaactggtgcgcggcgagatcgcgatcaagttcgacaagcgcaagatcgcggtg
ttcgatttgtag
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