Methylomonas sp. LW13: U737_04130
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Entry
U737_04130 CDS
T05879
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
metl
Methylomonas sp. LW13
Pathway
metl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U737_04130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
metl02022
]
U737_04130
02035 Bacterial motility proteins [BR:
metl02035
]
U737_04130
Two-component system [BR:
metl02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
U737_04130
Bacterial motility proteins [BR:
metl02035
]
Pilus system
Twitching motility proteins
U737_04130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
HTH_30
AAA_19
AAA_16
AAA_22
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QBC26172
LinkDB
All DBs
Position
942445..943785
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AA seq
446 aa
AA seq
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MNMPVTLVVDDEPDIQELLEITLNRMHIQTRCAANLAEAKQLLAVEVFDLCLTDMKLPDG
DGLDLVDHIQLAGLQLPVAVITAHGSMDIAIKAMKKGAFDFLSKPVDLGVLRQLVSHALQ
ASLTRVSDKERRTRDILLGESALMCAIRSKIDKVARNQAPVYISGESGSGKELVARLIHQ
QSPRGEKPFIAVNCGAIPPELMESEFFGHKKGSFTGAVADKQGLFQAADGGTLFLDEVAD
LPLPLQVKLLRAIQEKKVRPVGEQREVAVDVRLLSATHKDLTKMVQEGSFRQDLYYRINV
IELSLPPLRARPADIPQLTEHLLAGLANANGMDLPKLSDSALNALKHYYFPGNVRELENI
LERALALHDGGVIEADDLNLPLGMELAAVEDFDAEKMSLEAYLEDIEKKALSAALEENRW
NKTATAKYLGLSFRSLRYRLKKLGLE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcctgtcaccctggttgtcgatgacgaacccgacatccaagaattactcgaa
ataaccctgaaccgcatgcacattcaaactcgctgcgcggccaatttggccgaggccaaa
cagttactggccgttgaagtgtttgatttgtgtctcaccgatatgaagctgccggacggc
gatgggctggatttggtcgatcatattcaattggccggtttgcagttaccggtggcggtg
attactgcgcatggcagcatggatattgcgatcaaagccatgaaaaagggagcttttgac
ttcctgtccaagccggtcgatttgggggtattgcggcagctggtcagtcatgcgctgcaa
gcctcgctaactagggtttccgacaaggagcgccgtacccgcgacatcttgctaggcgaa
tcggcattaatgtgcgctattcgctcgaagatcgacaaggtggcgcgcaaccaggcgccg
gtttatatcagcggagagtccggttcgggcaaggagttggtggccagattgatacaccag
caaagcccgcgcggggagaaaccgtttattgcggttaattgcggagcgattccgcctgaa
ttgatggaaagcgaattcttcgggcataaaaaaggcagtttcaccggcgcggtagccgac
aagcaaggattgtttcaggcggccgatggcggcaccttgtttttggatgaagtggctgat
ttgcctttgcccttgcaagtcaaattgttgcgggcaattcaagagaaaaaggttcgcccg
gttggcgagcagcgggaagtagccgttgatgtgcgcttattgagcgcaacccacaaggat
ttgaccaagatggtccaagaaggcagttttaggcaggatttgtactaccggatcaatgtc
atcgagctgagtttgccacccctgcgcgcccggcctgctgatattcctcagcttaccgaa
cacttattggcgggcttggctaatgccaacggtatggatttgcccaaactcagcgactct
gcgctaaatgcgttaaagcactactattttcccggcaatgttcgggagctggaaaatata
ttggagcgggcgctggccttgcacgatggcggcgtgattgaagccgacgatctgaacttg
ccgttggggatggaattggctgcggtcgaagatttcgacgccgagaaaatgtcgctggaa
gcctatctcgaagacatagagaaaaaagccttgagtgcggcgctggaggaaaatcgttgg
aacaaaaccgctaccgctaaatacttgggtctaagcttccgttcgctgcggtatcgtttg
aaaaagttgggtcttgaataa
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