Methylomonas sp. LW13: U737_15785
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Entry
U737_15785 CDS
T05879
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
metl
Methylomonas sp. LW13
Pathway
metl00521
Streptomycin biosynthesis
metl00523
Polyketide sugar unit biosynthesis
metl00525
Acarbose and validamycin biosynthesis
metl00541
O-Antigen nucleotide sugar biosynthesis
metl01100
Metabolic pathways
metl01110
Biosynthesis of secondary metabolites
metl01250
Biosynthesis of nucleotide sugars
Module
metl_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
U737_15785 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
U737_15785 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
U737_15785 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
U737_15785 (rfbB)
00525 Acarbose and validamycin biosynthesis
U737_15785 (rfbB)
Enzymes [BR:
metl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
U737_15785 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QBC29959
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Position
complement(3462388..3463458)
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AA seq
356 aa
AA seq
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MSILVTGGAGFIGSNFVLDWLAQSDELLVNLDKLTYAGNLQNLASLHDDDRHVFVQGDIA
DYDLLLSLLQKYRIRAVINFAAESHVDRSIHGPEDFIQTNIVGSFRLLEAVRQYWNNLEQ
PAKQAFRLLHVSTDEVYGSLEKTDAPFAETHQYQPNSPYSASKAASDHLVRAYHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLCIQNALSGKALPIYGDGQQIRDWLFVKDHCSAIRRVLE
AGKLGEVYNVGGWNEKANLDVVNTLCSILDELQPRSDGKSYAEQITYVTDRPGHDRRYAI
DAGKLERELGWKPAETFETGIRKTVQWYLDNQAWVSNVLSGDYQSWLDKNYAGRTA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtattttagtcaccggtggggccgggtttatcggcagcaattttgtattggattgg
ttggcgcaaagcgacgaattgctcgtcaatttggataaattgacctatgcgggtaactta
cagaatttggcttctctacatgacgatgacaggcatgtatttgttcaaggtgacattgcg
gattacgatttgctgctgagtttactgcaaaagtaccggattcgggccgtgatcaatttt
gctgccgaatcacatgttgatcgttccatccacggaccggaagattttattcaaaccaat
atcgtcggcagtttccgtttgttggaagcggtacggcaatactggaacaacttggaacag
ccggccaagcaggcttttcgtttactgcacgtgtctaccgacgaggtgtacggttctttg
gaaaagaccgatgcgccgttcgctgaaacccaccagtatcaacccaatagtccttattca
gccagtaaagccgccagcgatcatttggtgcgtgcttatcaccatacttacggtttgcct
gtattgactaccaattgctccaacaattacggtccttatcatttcccggaaaaactcatc
ccgctgtgcattcagaacgccttgtccggcaaagctttgccgatatacggcgacggtcaa
cagatacgcgattggctgtttgtgaaggatcattgcagcgcgattcgccgggtgctggaa
gccggcaagcttggcgaggtttataacgtcggcggttggaacgaaaaagccaatctggat
gtagtcaacacgctatgcagtattctggatgagctgcagccgcgtagcgacggcaaatcc
tatgccgaacagattacctatgtcaccgaccggcctgggcacgacagacgttatgccatc
gatgccggcaagctggaacgggagctaggctggaaaccggcggaaacctttgagaccggc
attcgcaaaaccgtgcagtggtatttggataaccaagcctgggttagcaatgtgttgtcc
ggtgactaccagtcctggctcgataaaaactatgcagggcgcactgcgtga
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