Methanobacterium sp. BAmetb5: CIT02_07750
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Entry
CIT02_07750 CDS
T05745
Name
(GenBank) replication protein A
KO
K07466
replication factor A1
Organism
meto
Methanobacterium sp. BAmetb5
Pathway
meto03030
DNA replication
meto03420
Nucleotide excision repair
meto03430
Mismatch repair
meto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIT02_07750
03420 Nucleotide excision repair
CIT02_07750
03430 Mismatch repair
CIT02_07750
03440 Homologous recombination
CIT02_07750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meto03000
]
CIT02_07750
03032 DNA replication proteins [BR:
meto03032
]
CIT02_07750
03400 DNA repair and recombination proteins [BR:
meto03400
]
CIT02_07750
Transcription factors [BR:
meto03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
CIT02_07750
DNA replication proteins [BR:
meto03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CIT02_07750
DNA repair and recombination proteins [BR:
meto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CIT02_07750
MMR (mismatch excision repair)
CIT02_07750
DSBR (double strand breaks repair)
HR (homologous recombination)
CIT02_07750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
Rep_fac-A_C
Ssb-like_OB
POT1PC
RecG_wedge
DUF5088
DUF3127
zinc-ribbons_6
DZR_2
Prok-RING_1
DZR
Motif
Other DBs
NCBI-ProteinID:
AXV40216
UniProt:
A0A347AML9
LinkDB
All DBs
Position
complement(1627428..1629803)
Genome browser
AA seq
791 aa
AA seq
DB search
MREISQEIKDEYGKIKDKISYEEFLKKMEEYKEENADVSFIDDISIAQMVVGNYITEKNE
PTEEVKDFWKVADLETGTQHINLLGRVMSISNVKKFTSKKGREGKLANLILADETGRIRV
VFWTENIKLLDKIQEGDVVQINDVEVKQGFREDETHLNLHSSLEKLDPKEYPDLPPYNDK
ITPLNEVKGDEEVNVVGRITRVPRIRTFDRNGRDGKVASLELQDKSGTMQLTLWNKDTQI
IEDLELAEGDAIKVVGAQSRVRNGEVSLNHSWIGRIVKGDFDVPEYQEDILKIGDAHEMR
NVTLLGLVSKVYDTITFERDDGTTGKVKSLELEDDTGPIRVTLWNDDTELDVKKMDILKI
IGGNIEFDDYSGTNYRVNTNWNSKLIVNPPIDNDLKVLLNEVGKYLKPVKIGDLNNIEED
GEEVDVVGRVVNLYEPNEFQRDDGSMGMVRTIEIADDTGMVRVSLWDNKAEHPMKEGDAL
KIENARSRLGDYQVDLSVGRTSRMVAPSEEEIKALPSLKDVESMIYQTKKIQELAEGDRD
VSLSGRILSIGEPTQFTKSDGSSGLVRSIEIADESGVVRASLWDDQANAPLKEGEAIKIE
NPRVTLRNDNIELSVGRTTLINKVSDDEASVPSLEEIEGKLYPSKKIEDIEEGDQNIKVT
GEVVDIRGNKILFEMCPNCNKRVNWVDDAYICDICGEEIKKPNMLMIIGLLLEDDTGTIS
ITFFRKAAEEVLGMTTSEAEEIIATTGDEGSLEEKVGDLVGQQITVIADASFDEYNEEVR
LNARKTLDVKL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaattagccaagagataaaggacgaatatgggaaaattaaggacaaaatctca
tatgaagaattcctaaaaaagatggaagaatataaggaagaaaatgcggatgttagtttt
attgacgatattagcatagcccagatggtagtagggaactacattaccgaaaaaaatgaa
cctaccgaagaagtaaaggacttctggaaagttgcggatttagaaaccggcacccaacac
ataaacctactgggacgagtaatgagtatttccaatgttaaaaaattcaccagcaaaaaa
ggaagagaaggaaaactggcaaatttaatcctggccgatgaaaccggtagaatacgagtg
gtcttctggactgaaaacatcaaactgctggacaaaatccaggaaggagatgtggtccag
atcaatgatgtggaagtgaaacagggattccgtgaggatgaaacccacctcaacctacat
tcttccctggaaaagttggatccaaaagaatatcctgatttacccccatacaacgataaa
ataacccctttaaacgaagttaaaggagatgaagaggttaatgtggtgggccgtatcacc
cgagttccccggataagaacctttgaccgcaatgggagagatggtaaagtagcctcactg
gaactgcaggataagagtggcaccatgcagttaaccctgtggaacaaggacacccagatc
atcgaagatctggaactggctgaaggagatgctattaaggtagtgggggctcaaagcaga
gttcgcaatggagaagtatccttaaaccactcctggattggtaggatagtcaaaggagac
ttcgacgtccccgaatatcaggaagatattctcaaaataggtgatgcccacgaaatgagg
aatgtcacccttttaggattggttagcaaagtttacgacactataaccttcgaacgagac
gatggaaccaccgggaaggtgaagtcactggagttggaagatgatactggccccatacgg
gttaccttatggaacgatgacactgaactggatgtgaagaaaatggacatcctgaaaatc
atcggaggaaacattgaatttgatgattattctggcaccaactaccgggtgaacaccaac
tggaacagcaaactaatagttaatccccccattgacaatgatttaaaagttctcctgaat
gaagtgggcaaatacctgaaaccagtgaaaattggtgatctaaacaacatagaagaagat
ggagaagaagtggatgttgttggacgggtggtaaacctttatgaacctaacgagtttcag
cgagacgacggtagcatgggaatggtgagaactattgaaattgccgatgataccggaatg
gtgagagtttccctgtgggataacaaagcagaacaccctatgaaagagggagatgccctt
aaaatcgagaatgcccgtagccgtctaggggattatcaggtagacctcagtgtgggccgg
acctcccgaatggttgccccctccgaagaggagatcaaagcacttccctctcttaaagat
gtggaatcaatgatctaccagaccaaaaagatccaggaactggcagaaggtgaccgtgat
gtgagcctctccggccggattttaagcataggagaacctacacaattcaccaaaagtgat
ggtagctcgggtttagtacgttccatagagatagccgatgaaagtggagttgtacgagca
tctctatgggatgaccaggccaacgcacccctcaaagaaggagaagccattaaaattgaa
aacccccgagttaccctgagaaacgataacatagaacttagtgtaggtcgaacaaccctt
ataaacaaagtcagcgatgatgaggcctcagtgcccagtctagaggaaatagaaggaaaa
ttatacccctctaaaaagattgaagatattgaagaaggggaccagaacatcaaagtaacc
ggggaagtggtggatatccgcggtaacaaaatactctttgagatgtgccctaactgtaat
aaaagagttaactgggttgatgatgcttatatctgcgacatatgcggagaagaaattaaa
aaacccaatatgttaatgatcatcggtttattgctggaagatgacactggaaccataagt
atcacctttttccgtaaggccgccgaggaagtcttgggcatgaccacctctgaagccgaa
gaaatcattgccaccactggagatgaaggatcactagaggaaaaggtgggtgatctggtg
ggccagcaaatcacggtgatcgccgatgccagcttcgatgaatacaatgaggaagtgcgt
ttaaacgccagaaaaacgctggatgttaaactttaa
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