KEGG   Methylococcus geothermalis: GNH96_05020
Entry
GNH96_05020       CDS       T06585                                 
Symbol
cas6f
Name
(GenBank) type I-F CRISPR-associated endoribonuclease Cas6/Csy4
  KO
K19130  CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
Organism
metu  Methylococcus geothermalis
Brite
KEGG Orthology (KO) [BR:metu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:metu02048]
    GNH96_05020 (cas6f)
Prokaryotic defense system [BR:metu02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-F factors
    GNH96_05020 (cas6f)
SSDB
Motif
Pfam: Cas_Csy4
Other DBs
NCBI-ProteinID: QJD29387
UniProt: A0A858Q6E0
LinkDB
Position
complement(1043571..1044134)
AA seq 187 aa
MDAYLDIRLLPDPEFAATVLMNALFGKLHRALVERGGGRIGVSFPDVSDKPRSLGSRLRL
HGGAVELERLMALDWLTGIRDHTAIGEIAAVPADAVQRIVRRVQAKSNPERLRRRLIARR
GVSNEQAEQAIPDTAAEKLDLPYVVLASRSTGQQFRLFIEHLPVQEQAVSGTFSAYGLSA
TATVPWF
NT seq 564 nt   +upstreamnt  +downstreamnt
atggacgcctatcttgacatccggctgctgcccgaccctgagttcgcggcgaccgtattg
atgaatgccttgttcggcaaactgcatcgggcgctggtcgagcgcggcggcggccgcatc
ggcgtcagcttcccggacgtctccgacaagccacggtcgctgggctcgcggctacgcctt
catggcggcgccgtggaattggaaaggctcatggccctggactggttgacgggaatacgc
gatcacaccgcgatcggcgaaatcgcggcggttccggccgatgccgtacagcggatcgtc
aggcgggtccaggccaaaagcaaccccgagcggctccggcgccggctgatcgcccgccgg
ggtgtcagcaacgagcaagccgaacaggccattcccgacaccgccgccgaaaagctggac
ctgccctatgtcgtactggcgagccgaagcaccggccaacagttccgcctgttcatcgag
catctcccggtgcaggaacaagctgtgagcggcaccttcagcgcctacggcctgagcgcc
acggccacggtaccctggttctga

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