Methylobacterium sp. XJLW: A3862_17800
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Entry
A3862_17800 CDS
T05508
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx03410
Base excision repair
metx03430
Mismatch repair
metx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3862_17800
03430 Mismatch repair
A3862_17800
03440 Homologous recombination
A3862_17800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_17800
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A3862_17800
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A3862_17800
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A3862_17800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Motif
Other DBs
NCBI-ProteinID:
AWV17127
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Position
3913431..3915257
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AA seq
608 aa
AA seq
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MASVSSAPLSVDPPPFLGVAASITGRRWQERCGGAAVQNHIAKMVQAHGLPELLARVLAG
RGIGPEAAPRHLAPRLRDLMPDPNTLLDMDAAVRRLVRAVRRGETVAVFGDYDVDGAASA
ALLAGYLRGVGLRAPIHIPDRITEGYGPNIAAITALAADGATLLVCVDCGTSGHAPLEEA
EKSGLDVIVLDHHAASEVLPPARAVVNPNRLDDLSGLGHLCAAGIVFLTLVALNRALRLE
GFFGPDRPEPQLTDALDLVALATVADVVPLTGLNRAFVTQGLTVMRHRGRIGLAALLDAA
SLSEPPESWHLGFVLGPRINAGGRIGDSALGARLLTTADPNEAARIAADLDRLNRERQAI
EAQAVSEAEAEMDRALTLDPTRTVLVTASPEWHPGIVGLIASRLKERFNRPAFAFAIRPD
GSATGSGRSIPGSDLGLAVRACVEAGIALKGGGHAMAAGVTVRTDDIPRFEAHLVMLLGA
SVTVARAADALLIDGGLSAGGATAETVRLLQQAGPFGQGAPEPIFALGRHRLVDAGVVGS
SHVRARLRSRDGQAVGAICFRAAERPLGLALLNGIGRELHVAGTLSCDRWRGAERAQLRI
VDLAPVDP
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcatccgtgtcatccgccccgctctccgtcgatccgccgcccttcctgggggtcgcc
gcctccatcaccggccggcgctggcaggagcgctgtggcggcgcggcggtccagaatcac
atcgccaagatggttcaggcccacggcctgccggaattgctcgcccgtgtgctggcaggg
cgcgggatcggtccggaggccgcgccgcgccaccttgcgccgcgtctgcgcgacctgatg
ccggacccgaatacgctgctcgatatggacgccgccgtccgccgcctggtccgggccgtg
cgccgcggcgagaccgtggcggtcttcggcgactacgacgtggacggcgctgcgagcgcg
gccctgctcgccggctacctgcgcggtgtgggcctgagggctccgatccacatccccgat
cggatcaccgagggctacggccccaacatcgctgcgatcaccgcattggcggcggacggc
gcgacgcttctggtctgcgtcgattgcggcacgagcggccacgcgcctctggaagaagcc
gagaaatcgggcctcgacgtgatcgtcctcgaccatcatgcggcctccgaggtgctgccg
ccggcccgcgccgtggtcaatcccaaccgcctcgacgacctgtcgggcctcggccatctc
tgtgccgccgggatcgtgttcctcaccctggtggcactgaaccgtgccctgcggctggag
ggcttcttcgggccggaccgccccgaaccgcagctcaccgacgccctcgacctcgtagcg
ctggcgaccgtggccgacgtcgtgcccctcaccggtctcaaccgggccttcgtgacgcag
ggcctgacggtgatgcgccatcgcggccgcatcggcctggcggccctgctggacgcggcc
tcgctgagcgaaccgccggaatcgtggcatctcggcttcgtcctcgggccgcgcatcaat
gccggtggccgcatcggcgattcggccctcggtgcccggcttctgacgacggcggacccg
aacgaagcggcccggatcgccgccgacctcgatcgcctcaatcgcgagcgtcaggcgatc
gaggcgcaggccgtctccgaggccgaggccgagatggaccgtgccctgacgctcgacccg
acccgcaccgtgctggtcacggccagtcctgagtggcatcccggcatcgtcggactcatc
gcgtcgcgcctgaaggaacggttcaaccgcccggccttcgccttcgcgatccgacccgac
ggcagcgccaccggctcgggtcgctcgatcccggggtcagatctcgggcttgcggtgcgc
gcctgcgtcgaggccgggatcgccctcaaggggggcggacacgccatggcggccggcgtc
accgtacggaccgacgacatcccccgcttcgaggcgcatctcgtcatgctgctgggggcg
agcgtgaccgtggcgcgggcggccgacgccctgctgatcgacggcggactcagcgccggg
ggcgctaccgcggaaacggtccggctgctccagcaggccggaccgttcggacagggcgcg
ccggagccgatcttcgccctcgggcgccatcgcctggtcgatgccggcgtggtcgggtcg
agccatgtcagggctcgcctgcgcagccgcgacggacaggcggtgggcgccatctgcttc
cgtgccgccgagcgccccctcggcctcgcgctgctgaacgggatcggtcgggaactgcac
gtggccggaacgctgtcctgcgaccgctggcgcggggccgagcgggcccagctccggatc
gtcgatctggcgccggtggacccctga
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