Methanobacterium formicicum DSM1535: DSM1535_2301
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Entry
DSM1535_2301 CDS
T03743
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K03725
putative ATP-dependent RNA helicase [EC:3.6.4.-]
Organism
mfi
Methanobacterium formicicum DSM1535
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfi03019
]
DSM1535_2301
Messenger RNA biogenesis [BR:
mfi03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
DSM1535_2301
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
CEA14655
UniProt:
A0A090I8I0
LinkDB
All DBs
Position
complement(2318936..2321425)
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AA seq
829 aa
AA seq
DB search
MIILRRKKKIVELFPIGSSKGALNSRRKPLFHGYIKFRRVDGQLKIHKFIVKKDKETILP
PSEAIKILRKQNIFLVGKDPDTEEFLQSLNIKYNHTLICRHCTFEGFITLIQRDKSYSYH
GDHLCRLCAESEIKRELKAHSYDLSTFSRFRKMLDETGDLAKVLSVFDPRFDPLKHQELT
LYDKITTRKSNVPQIRIDQLKIPEKFKKSLKTQGTHLLPVQVLALQAGLLEEENLLVVSA
TASGKTLIGELAGIPHALEGGKFLFLTPLVALANQKYRDFKKRYQKLGLNVSIRVGMSRI
KAKEELTLPDEKIDAADIVVGTYEGLDFLLRAGRSSQLGNLKTVVVDEIHMLGDDERGPR
LRGLIHRLKSIFPDLQVIGLSATVQNPQEIATEFGMKLVQYPLRPVPLERHLIFTRTEEE
KNHLLTQLSRNEYQNRSKKGYHGQSIIFTNSRRKTHSVADYLTRRGVKAAAYHAGLSYSK
KNRIERDFGGQKLGAVVTTAALAAGVDFPASQVLFESLTMGNKTLTPNEFSQMLGRAGRP
TYHDQGKVYLLPEIGRSYGDETEEMQAMELLSSDVEAVNVTYSEDSQVEQFLADICAGRA
DKFSQIGQEYANEELPLEFEEAFNLMVDYGLVKEMDGKVTPTRYGRAVSMSFLSHFCAEY
IRKNLDRMHPMDIALKLEPFESAYLSSRITTQMSRILKINMSTRLFADSTLDILSSGTAL
NKLEPRLRERLMKLQMDFYTCKCKDRPFCGCFQRELSRRMVKQRLSKRDPVDISRKLMRD
YEIHAYAGDIFSWLDSLIRMLEAVRRIAQAFGRKKVVGECNRLIRQIEN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgataattttaaggcgtaaaaagaagattgtagaattatttcccattggaagttccaaa
ggggctttgaatagccggagaaaacctttattccatggttatattaagtttcgccgggtg
gatggccagctgaagatccataaattcatagtaaaaaaggataaagaaaccattctaccc
cctagcgaggccataaagatcctgaggaagcagaacatcttcctcgtgggtaaggaccct
gatactgaagaattcctccagtcattgaatataaaatacaatcacactctcatatgcagg
cactgcaccttcgaaggttttatcaccctcatacagagggacaaatcctactcctatcac
ggagatcatctgtgccgtttatgcgcagaatcagagataaaaagggaattaaaggcccat
tcctatgacctgagcactttttcccgattcaggaagatgctggatgagaccggtgatctg
gccaaggtgttgagtgtttttgacccccgcttcgatccactcaaacaccaggagctcact
ctttacgataaaatcactaccagaaaatctaacgtcccacaaatcagaattgaccagtta
aaaatcccggaaaaattcaagaaatctctgaaaacccaggggactcatcttctaccggtt
caggtactggcactccaggctggactcctggaagaggagaacctcctggtggtatccgcc
actgccagtggaaaaacactaatcggggaactggcgggcataccccacgccctggaaggg
ggcaaattcctctttttaacccctctagtggccctggccaaccagaaataccgtgatttc
aagaaaagataccagaaactgggattgaatgtctccataagagtgggcatgagccggata
aaagccaaagaagaactcactctacccgatgaaaagatagatgccgcagatatagtggtg
gggacctacgagggcctggacttcctcctccgtgccgggagatcatcccaactgggaaac
cttaaaaccgtggtggtggatgagatccacatgctgggggatgatgaacggggcccccga
ctaaggggactcattcaccggttgaaatcgatctttcctgacctgcaagtcatcggactt
tccgccactgtgcaaaacccccaggaaatagccacggagtttggcatgaaactggtgcag
taccccctgcgaccggttcccctggagagacacctcatattcacccgcactgaggaagag
aaaaaccatcttctaactcagctgtcccgtaatgaataccagaaccgatcaaaaaaggga
taccatggtcagagtattattttcaccaattcacgccggaaaacccatagtgtggctgat
tatctgactcggagaggtgttaaggcagcagcataccatgctgggttgtcttactccaaa
aagaacaggattgaaagggattttgggggccaaaagttgggggcagtggtcaccacggct
gcgttagccgcaggggtggattttcctgcatcccaagtactttttgaaagtttaaccatg
gggaacaagacactcacccccaatgagttctcccagatgctgggccgggcaggaagaccc
acctatcatgaccagggaaaggtatatctcttgcccgagattggtcgcagttacggtgat
gaaaccgaggaaatgcaggccatggaacttttatccagtgatgtggaagcagtgaatgta
acctactctgaggacagtcaggtggaacagttcctggcagatatctgtgccgggcgcgcc
gataaattcagccagataggtcaggaatatgccaacgaagagctacccctggaatttgag
gaagcattcaatctaatggtggattatggtctggtaaaggagatggatggtaaggtaacc
cccaccagatacgggagggcggtttccatgtctttcctatcacatttctgtgcagagtac
atccgaaagaatctggaccgtatgcatcccatggatatagcccttaaactggaaccattt
gaaagtgcctatctttccagcaggataaccacccagatgagccgtattctcaagataaac
atgtccacccgcttatttgcagacagcacccttgatattcttagttcgggcacagccctt
aacaaactggaaccccgcctcagggaaagattgatgaagcttcagatggatttttacacc
tgtaaatgtaaggataggccattttgtggatgtttccagagggaactatctcggagaatg
gttaaacaacgcctgtcaaaacgggatccagtggatataagccggaagttgatgcgtgac
tacgagatacacgcctatgccggggatatattcagctggctggactcacttatccggatg
ctggaggcagtgcggaggatagcccaggcctttggaagaaaaaaagtggttggggaatgt
aatcgtttgatacggcagattgaaaactaa
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