Mariprofundus ferrinatatus: Ga0123462_1306
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Entry
Ga0123462_1306 CDS
T05213
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mfn
Mariprofundus ferrinatatus
Brite
KEGG Orthology (KO) [BR:
mfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfn03016
]
Ga0123462_1306
Enzymes [BR:
mfn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Ga0123462_1306
Transfer RNA biogenesis [BR:
mfn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ga0123462_1306
Prokaryotic type
Ga0123462_1306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ATX82170
UniProt:
A0A2K8L4C0
LinkDB
All DBs
Position
complement(1327645..1328409)
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AA seq
254 aa
AA seq
DB search
MALEFDGSAFHGWQQQDNAVSVQASLQEALAEIEGKPVSTVAAGRTDSGVHAEALLVHAD
VSAERWQRSHLAYIHGVNSKLPDTVRVVGVRAVNSDFHARFDCRERAYRYQIWNRNTPSA
IYRWRHWWMPRPLDVDAMCEAALCCLGTHDFSTLRASGCQAAHAIRTISRINVKRSDGVI
TIEVAADAFLYHMVRNLVGNLVDVGLGRQSPEGFARLLDQKDRSKAAATAPAHGLYFVDA
VYDGFSSRELIGNS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcactggaatttgatggcagtgcgtttcacggctggcagcagcaggataacgccgtt
tctgtgcaggcttcgttgcaggaagccttggcagagatcgagggtaaacctgtttctact
gttgctgcaggacgaaccgatagcggtgttcatgctgaggcactgctggtacatgcggat
gtctcggcagagcgatggcagcgatcacacctggcctatatacacggggttaacagcaag
cttccggatacggtcagggtagtgggagtacgcgctgtaaactccgatttccatgcccga
ttcgattgcagagagagggcataccgctatcagatatggaatcgcaacaccccttctgcg
atctatcgctggcgacactggtggatgccccggccgctcgatgttgatgcgatgtgcgaa
gctgctttatgctgccttggcacgcacgatttcagcacgcttcgagcttcaggatgtcag
gcggcccacgcaatccggacaatcagccggattaatgtgaagcgatccgatggggtgatt
accatcgaggtggctgccgatgccttcctctatcatatggtccgtaacctggtggggaat
ctggtagatgttggattgggaaggcagagcccggaagggtttgcgcgactgctggatcag
aaagacagaagcaaggccgcagcgactgcacctgcccatggcctctactttgtcgatgca
gtctatgatggcttcagctcccgtgaactgattggcaatagctga
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