Mucilaginibacter ginsenosidivorans: FRZ54_21660
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Entry
FRZ54_21660 CDS
T06123
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mgin
Mucilaginibacter ginsenosidivorans
Pathway
mgin03030
DNA replication
mgin03430
Mismatch repair
mgin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRZ54_21660 (dnaE)
03430 Mismatch repair
FRZ54_21660 (dnaE)
03440 Homologous recombination
FRZ54_21660 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgin03032
]
FRZ54_21660 (dnaE)
03400 DNA repair and recombination proteins [BR:
mgin03400
]
FRZ54_21660 (dnaE)
Enzymes [BR:
mgin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRZ54_21660 (dnaE)
DNA replication proteins [BR:
mgin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FRZ54_21660 (dnaE)
DNA repair and recombination proteins [BR:
mgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FRZ54_21660 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
RE_MjaI
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QEC65066
UniProt:
A0A5B8V3B9
LinkDB
All DBs
Position
complement(4750023..4753607)
Genome browser
AA seq
1194 aa
AA seq
DB search
MPDFSHLHVHTQFSLLDGAADISKLYKKAAADGMKALAITDHGNMFGVFKFVAEAGKHNI
KPIVGCEFYVVDDRHKKQFTKEKKDVRYHQLLLAKNAEGYRNLVKLCSLGYIEGLYSKWP
RIDKELILKYHKGLIATTCCIGASVPQAILKKTEDEAEDEFKWWLDLFGEDYYIELQRHD
IPEQDVINNTLQKYARKHNVKMICSNDSHYVDQQDSNAHDILLCVNTGDMQSTPIATDEE
GGKGYRFGFPNDQFYFKTQAEMGKLFHDLPESLDNTNEIVDKIDVLKLKRDIMLPNFVIP
DEFKIHKTADADTLNQWEYLKHLTFLGAKERYRDITPDVEERINFELFTIKTMGFAGYFL
IVSDFIKAGRDMGVFIGPGRGSAAGSVVAYCIGITNIDPIKYNLLFERFLNPDRKSMPDI
DTDFDDAGRQKVIDYVVDKYGKNQVAQIITYGSMAARTSIQDVGRVLDMPLSDVNALKKL
VPETLGITLRGAIDQVPELKEIYNDPGLKGIVLREAEKLEGSVRNTGVHAAGIIIAPDDL
TNIVPVATAKDSDLLVTQFDGRVIEDAGVIKMDFLGLKTLTIIKDALRLIKQNHGVDIDI
DYISLEDEKTFELYQKGDTNGTFQFESDGMQMYLRDLKPDKFEDLIAMNALYRPGPIEYI
PNFIKRKHGLEPITFDLDDMEEYLGETYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMG
KKQIEVLNKMEAQFMDGAAAKGHPKDKLTKIWNDWKAFAQYAFNKSHSTCYAFVAYQTAY
LKAHYPAEYMAAVLNNQNSIDKISFFMEECRRMGVPVLGPDINESDMAFAVNKKGEVRFG
LTGVKGVGEKAIESIIDERVANGPYESIYDFARRSNVRAVNKKSYENLVYSGAFDEFKYN
RAQFFAKTENGLLNGIERMIKYANDYQNTQSSSQASLFGGGVASYIPEPPLPEAEEFPLI
EKLKYEKDVIGIYLTGHPLDNYKLELQRYCNSTVTDLVTIQKARSGEGGDDIKSAFAELR
KKGELCVGGLVSNVQHKMTKTGKPFGTFVLEDYNDSYEFALFGDDYVKFRNLLVNDYFLQ
LRGSIEEKFRQKDNWDMRINSIVLLTEIRDKMAKSMTVCLELNSVNNDLMDSLQQIVEAN
NQKYPVKNCTLRFMVKDIEEALLVELPSKSFKVNPSDDLLEEIHNLTHVQPMLN
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgccagatttttcgcacttacacgtacatacccagttctcgcttttagacggggccgcc
gatatatccaagctgtacaaaaaagcggctgccgatggcatgaaggccctggccattacg
gatcatggaaatatgttcggtgtattcaagtttgttgcggaggctggcaaacacaacatc
aaacccattgtcggctgcgagttttacgtggttgatgatcgccataaaaaacaattcacc
aaggaaaaaaaagatgtccgctatcaccagctgttgctggcaaaaaatgccgaaggatac
cgcaatcttgtaaaactatgctcgttgggttatatcgaagggctatacagcaaatggccg
aggatagataaagagcttatcctgaaatatcacaaagggttgatcgcgactacctgctgc
atcggtgcatccgttccgcaggccatattgaaaaagacggaagatgaagcagaagatgaa
ttcaagtggtggcttgacctgtttggtgaagattactatatagaactacagcggcatgat
atacccgagcaggatgttatcaacaacactttgcagaagtatgccaggaagcataatgta
aagatgatctgttcaaacgattcgcactatgtggatcagcaggactcgaacgcacatgac
attttgctttgcgtaaataccggcgatatgcaaagcacgcccatagcaacggatgaagag
ggcgggaagggataccgtttcgggtttcccaacgatcagttctactttaagacccaggcc
gaaatgggtaagctgtttcacgatctgcctgagtcgctggataacacaaacgagatagtg
gataagatagatgtcctgaaattaaaaagggatattatgctgccaaacttcgtgataccc
gacgaatttaaaatacacaagacagctgatgccgatacactaaaccagtgggaatacctg
aagcacctgacgtttttaggagctaaggagcgttaccgggatataacaccggatgtggag
gaacgtatcaatttcgagctgttcaccatcaaaacaatggggtttgcagggtatttcctt
atcgtatccgactttatcaaagcaggccgcgatatgggggtatttattggaccgggccgt
ggttcggctgctggttctgtagtagcttattgcataggtatcaccaacatcgacccaata
aaatataacctcctgttcgaaaggtttttgaaccccgaccgtaagtcgatgcccgatatt
gatacggattttgacgatgccggcaggcaaaaggtgatcgattatgtagttgacaaatac
ggaaagaaccaggtagcgcagatcatcacctacggttcgatggctgcccgcaccagtatc
caggatgtgggccgcgtgctggatatgcccttatccgatgtgaacgcgctaaaaaaactg
gtgcctgaaactttgggcatcacgctgcgcggcgccatagaccaggtgcctgagctgaag
gaaatttataatgatcccggattaaagggtatcgtattgcgcgaagcggagaaactggaa
ggctctgtaagaaacacaggtgttcacgctgccggtatcattattgcgccggatgacctg
accaatatagttcctgtcgcgacagcaaaggattcggacctgctggttacccaattcgac
ggtcgtgtgatagaagacgccggggttatcaagatggactttttgggcctgaagacgctg
accattattaaagatgccctgcggctcatcaaacaaaatcatggcgtcgatatcgacata
gattacatatcgcttgaggacgagaagacgttcgagctttatcaaaagggtgataccaac
ggtacgttccagtttgaaagtgatggtatgcagatgtacctgcgtgacctgaagccggat
aagtttgaagaccttatagccatgaacgcgctctaccgtccggggccgatcgagtatatc
ccgaactttatcaagcgtaagcatgggctggagccgatcaccttcgaccttgacgatatg
gaggaatacctgggcgaaacctacggtattacggtttaccaggaacaggtgatgctttta
tcgcagaagctggccggctttagtaaaggcgacgccgacgtgctgcgtaaggccatgggt
aaaaagcagatagaagttttgaacaaaatggaggcccagtttatggatggggccgctgcg
aaggggcacccaaaagataaactgaccaaaatttggaacgactggaaggcttttgcacaa
tatgcgttcaacaaatcccattctacctgttacgcctttgtggcttaccaaaccgcttac
cttaaggcgcattaccctgccgaatacatggcagcggtattgaataaccaaaatagtatc
gataaaatatccttctttatggaggaatgccgcaggatgggtgtccccgttctgggtccg
gatattaacgaatcggatatggcctttgcggtcaacaaaaaaggcgaggtgcgctttggc
ttgacgggtgtaaaaggtgtaggcgaaaaggcaatagagagcattatagacgaacgcgtg
gcgaatggaccttacgaaagtatctacgatttcgccaggcgttccaatgtgcgggcggtt
aacaaaaaatcgtacgaaaacctggtttacagcggtgcctttgatgaatttaaatataac
cgcgcgcagtttttcgccaagacggagaacggcctgctgaacgggatagagcggatgata
aaatacgccaatgattatcaaaatacccaaagcagttcgcaggcgtcgttgtttggtggt
ggcgtggcctcttatataccagagcctccgctgccagaggctgaagagttcccattgata
gagaaactgaaatacgaaaaggatgtcatcggtatataccttaccgggcacccgcttgat
aattataagctggagctgcagcgctattgtaatagcaccgtgacggatttggtcaccatt
caaaaagcgcggtcaggtgagggtggtgatgatattaaatccgcatttgcagagctgcgt
aaaaaaggagagttgtgtgtgggcgggctggtatctaacgttcagcataaaatgacgaaa
acggggaagccgttcggcacctttgtgctggaggattataatgattcgtacgagtttgcc
ctgtttggcgatgattatgttaagttcaggaacttgctggtaaatgattattttctgcaa
ttgagggggagcattgaggagaaattccggcaaaaggataactgggatatgcggatcaat
tcgatcgtattgcttaccgagatcagggataaaatggccaaatcgatgacggtatgcctg
gaactaaattctgtaaataacgaccttatggacagcctgcaacaaatagtagaggcgaat
aaccagaaatacccggtgaagaactgcaccttaagatttatggtgaaggatattgaagaa
gcgctactggttgaattgccttccaaatcatttaaggtaaacccaagcgacgacctgctg
gaagaaattcacaatttgacgcacgtgcagcctatgttgaattaa
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