Mucilaginibacter ginsenosidivorax: FSB76_05580
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Entry
FSB76_05580 CDS
T06204
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
mgk
Mucilaginibacter ginsenosidivorax
Pathway
mgk00550
Peptidoglycan biosynthesis
mgk01100
Metabolic pathways
mgk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mgk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FSB76_05580 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FSB76_05580 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mgk01011
]
FSB76_05580 (mrdA)
Enzymes [BR:
mgk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FSB76_05580 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
mgk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FSB76_05580 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QEC75441
UniProt:
A0A5B8VW87
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All DBs
Position
1379554..1381566
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AA seq
670 aa
AA seq
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MNNFFERRYVITGIFVAIILTLLARLYYIQIVDDRYAIYATKNVIRSFIQYPARGPILDR
NGKILVQNVPIYDIMVTPKDVKPFDTVAFCNLLGIDKDGFNKRWIKAIKYSPNKDSPFEK
QISAERFASIQEKINDFTGFYALPRTVRTYPDSVAAQFLGYIGEAQDRDIKRSNGYYRLG
DYIGITGVEKAYENVLRGQRGVKNMMVDSRGAQKGSFANGAFDTVARTGERLTSSLDIEL
QKLGEQLMQNKLGSIVAIEPSSGEILAYVSSPTYDPNLMVGRERGNNAAKMYNNPYKPFF
IRPIQAQYPPGSSFKPLSALIALQENIISPSETYYCTGHYRAGNRLVPCNNGEAHGTVNM
GRAVAESCNGYFSMVFQRILERSGAKYTEAEFTKWRANVMKFGLGARLDLDMPAESRGNV
PTPLHYDNVYKKGGWRASTIISLAIGQGELLATPLQMANLECTIANHGFFYKPHLIKAIG
TENVIKAEYTKRNYVGIDSQYFEPVINGMQAVVEDGTARRSKIPGIIMCGKTGTAQNPRG
EANSVFVAFAPRENPKIAIAVVVENSGEGAHWAAPIASFIVEKYLRGKITPRESGITVDY
FANANRMPDLTLYALDLKKERMRDSIRAVKADSIKKFKADSIKKAARLKTANNNKPNNWG
NLLAGRGAGK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttttgagcgtcgctacgtcatcaccggtatttttgtagctataatttta
acgctgctggccaggctttactatatccagatagttgacgaccgctacgccatttacgct
accaaaaacgttatccgcagttttatccaataccctgcccgcggtcccattttagatagg
aatggtaaaatactggtacaaaacgtacctatttacgatatcatggtaacgcccaaagat
gtaaaaccctttgataccgttgcattttgtaacctgttgggcattgataaggatggcttt
aacaagcgctggataaaagccatcaaatattcgcctaataaagactccccttttgaaaaa
caaatatcggccgaacgctttgcttcgatacaggaaaaaataaacgactttaccggcttt
tatgcattgccccgtactgtacgtacttatcccgattcggttgcagcgcagtttttaggt
tacattggtgaggcgcaggaccgcgatatcaaacgctccaacggttattaccggctgggc
gattatattggaataaccggcgtggagaaagcttacgaaaatgttttgcgcggacagcgt
ggtgttaaaaacatgatggttgattcgcgcggggcacaaaaaggctcattcgccaatggc
gcttttgatacggtggcacgtaccggcgagcgacttacttcctcgttagacatcgaacta
caaaaactaggcgaacagctgatgcaaaataagctgggcagtattgtggccattgaacca
tcgagcggcgagatactggcttatgtaagcagccctacttatgaccctaatctgatggtt
ggccgcgagcggggtaacaacgctgccaaaatgtataacaacccgtataagccgtttttc
atcaggcctatacaggcgcagtatccgccgggctcatcatttaaaccattaagtgcgttg
atagctttgcaggaaaacattatctccccttcagaaacatactattgcaccgggcattac
agggccggcaaccggctggtaccatgtaacaatggcgaagctcacggtacagttaacatg
ggcagggcggtagccgaatcatgtaacggttatttttcgatggtgtttcaacggatattg
gaacgcagcggagccaaatataccgaagcagaatttacaaagtggagggccaacgtaatg
aaatttggtttaggcgcccggctggacctggatatgcctgctgaaagccgcggaaacgta
ccaacgccactacattacgacaacgtttataaaaaaggcggctggcgtgccagtaccatc
atttctttagccataggccagggcgagttgttggcaaccccattacaaatggccaacctg
gaatgcactattgccaaccatggttttttttacaaaccacacctcattaaagccattggt
accgaaaatgttattaaggccgagtataccaaaagaaattatgtgggtatagattcgcaa
tactttgaaccggtaataaatgggatgcaggctgtggtggaagatggtaccgcccgccgg
tcaaaaattccgggcattatcatgtgcggcaaaacaggtacagcgcaaaacccgcgtggc
gaagctaactcagtatttgtagccttcgcaccgcgcgagaaccctaaaatagccattgcc
gttgttgtagaaaactcgggcgagggtgcgcattgggctgctcctattgccagctttatt
gtcgaaaaatatttaaggggtaagataacgccacgcgaatcgggcattacggttgattat
tttgccaatgccaaccgcatgcccgatttaacgctttacgccctggatttgaaaaaggaa
cgcatgcgcgatagtatccgcgcggtaaaagccgactccataaaaaaattcaaggccgac
tccataaaaaaggcggcacgtttaaaaacggcaaacaataacaaaccgaataactggggc
aatttattagcaggcaggggggctggcaaatag
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