Magnetococcus marinus: Mmc1_3483
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Entry
Mmc1_3483 CDS
T00427
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mgm
Magnetococcus marinus
Pathway
mgm03420
Nucleotide excision repair
mgm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mmc1_3483
03430 Mismatch repair
Mmc1_3483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgm03400
]
Mmc1_3483
Enzymes [BR:
mgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mmc1_3483
DNA repair and recombination proteins [BR:
mgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mmc1_3483
MMR (mismatch excision repair)
Other MMR factors
Mmc1_3483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_22
AAA_12
AAA_11
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
ABK45968
UniProt:
A0LDC5
LinkDB
All DBs
Position
4350411..4352432
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AA seq
673 aa
AA seq
DB search
MDHPTLHHLNAPQRQAVTTLDGPLMVLAGAGSGKTRVLTRRLAWIIQQQQASPEEVLAVT
FTNKAAKEMRNRVQALLGLDAPAQAHRFWIGTFHGMSARMLRQYADRLGFERDFTILDSS
DQERLFKRLCEELGFADAYWTPKRLTHTIGRWKDDGIRPQDLTDREIRKAWERARIQQMY
ERYQQALLQSNAMDFGDLLLHCLQLWQQEPAILAAFQQRFRYLLVDEYQDTNHVQYRWIC
ALSGLHQNLCVVGDDDQSIYSWRGARIENILKFEEDFPQTKIIRLEQNYRSSGNILKAAS
GLINHNKGRMEKQLWTEDAQGDAIHFYQAENDEDEARFVASEILTLCPAGDYQQAAILVR
TARQTRSLEEGLMRAGIPYQVVGGLRFLDRAEVRDALAYLRVVASNRDDVAFERVINLPK
RGIGPGALQSLREIASQERCSLLHAARFAVESNTMKGAAAKGLAAFIQLIEHARSMLADD
ITPAEMLTKLLALSGYRDYVRDLEKGNDRIDNLDELRNALARTESLQLFLEEVALATDLQ
DGGPVANRVVISTLHAAKGLEFPWVFLVGVEEDVMPHKLALTEQPEIGLEEERRLAYVGM
TRAKQRLYLTMARRRWLFNKPVMPIKSRFLKELPQEILEDRGFRVSSRRGATGSLAGLPG
GSLHHQKVRFPLR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcccacactgcatcatctcaacgccccccagcggcaagccgttaccaccctg
gacggccccctcatggtcttggccggggcaggatcgggcaaaacacgggtattgacccga
cgtctggcctggattatccaacagcaacaggcctcccctgaagaggtgctggcggtgacc
tttaccaataaggccgccaaagagatgcggaaccgggttcaggcgttactgggtttggat
gcccccgcccaggcccaccgcttctggattggtaccttccacggcatgagcgcccgcatg
ctgcgccaatacgccgaccgccttggctttgagcgggactttaccattcttgacagcagc
gaccaggagcgcctatttaaacggctctgtgaagagttgggctttgccgatgcctactgg
acccccaagcgcctaacccacaccattggacgctggaaagatgatggcattcgcccccag
gatttaaccgatcgggagatccgtaaagcgtgggaacgggcgcgtattcaacagatgtac
gaacgctaccagcaagcactgctgcaaagcaatgccatggattttggcgatctgctgctg
cactgtctgcaattgtggcaacaggaaccggccatcttggcggcctttcagcagcgcttt
cgctatctgttggtggatgagtatcaagataccaaccatgttcaataccgctggatctgc
gctctatcagggttgcaccaaaacctctgtgtggtgggggatgatgaccaatccatctac
agttggcggggggcacgtattgaaaacattctcaagtttgaagaggatttccctcaaacc
aagattattcgtttggaacaaaactatcgctccagtggcaatatccttaaagccgccagc
ggcctgatcaaccacaacaagggccgcatggaaaaacagctctggaccgaagatgcccaa
ggcgatgccattcacttctaccaagcggagaatgatgaggatgaggcacgctttgtggcc
tcggaaattctcaccctctgccccgctggggattatcaacaggcggctattctggtgcga
accgctcgccagacccgctccctggaagagggtttgatgcgggcgggtattccttatcag
gtggtgggggggctgcgctttttggatcgcgccgaggtgcgcgatgccttggcctatctg
cgggtggtggcctctaaccgggatgatgtggcctttgagcgggttatcaatctccccaag
cgtggcattggcccaggtgccctgcaatccctgcgggagattgccagccaggagcgctgc
tctttgctgcatgcggcccgctttgcggtcgagagcaacaccatgaagggggctgcggcc
aagggtttggcagcttttattcagctcattgagcacgctcgcagcatgctcgccgacgat
ataacccccgctgagatgctcaccaaactgttggccctaagtggctaccgggattatgta
cgggatctggaaaagggcaacgaccgtatcgacaacctggacgaactgcgtaatgccctg
gcccgcactgagagtttgcaactatttttggaagaggttgcccttgccaccgacctccag
gatggcggaccagttgccaatcgggtggtgatctccaccctgcatgccgccaaggggttg
gagtttccctgggtgtttctggtgggggtcgaagaggatgttatgccccataaactggcc
ctcaccgaacagccggagatcggcttagaggaggagcggcgcttggcctacgttggcatg
acccgcgccaaacagcggctttatctcaccatggcgcgtcgtcgatggctctttaataaa
ccggttatgccaattaagtcccgttttttaaaggagcttcctcaagaaattttagaggat
cgtggttttcgtgtgagcagccgacgcggtgccacaggcagcttggcgggcctgcccggt
ggatcattgcaccaccagaaggtgcgctttccgttacgttaa
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