Mycolicibacterium goodii: AFA91_07880
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Entry
AFA91_07880 CDS
T04008
Name
(GenBank) RNA polymerase factor sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mgo
Mycolicibacterium goodii
Brite
KEGG Orthology (KO) [BR:
mgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgo03021
]
AFA91_07880
Transcription machinery [BR:
mgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AFA91_07880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
NTF2
SnoaL_4
Acetyltransf_6
SnoaL_3
Motif
Other DBs
NCBI-ProteinID:
AKS31813
UniProt:
A0A0K0X3C0
LinkDB
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Position
complement(1652672..1653694)
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AA seq
340 aa
AA seq
DB search
MSVVLRKLTDVTVLAHRLGDDSPADAFLAEAQTYRRELLAHCYRMTGSLHDAEDLVQETY
LRAWKSYEGFQGRSSVRTWLYRIATNTCLTSLEGRARRPLPSGLGTPSSAPTDDITEHHE
VPWLEPLPDGDDPADPSEIVGNRESVRLAFVAALQHLSPRQRAVLVMREVLQWKASEVGD
AIGASTAAVNSLLQRARAQLETVAPSADDRIEPPESPQAQATLDKYMAAFEAYDIDKLVE
LFTEEAIWEMPPFDTWYRGPQAIGDLSRHKCPAEKPGDMRFIRTTANGQPAAAMYMRNPD
TGRHEAFQLHVLDITAGGISHVVAFMGEGLFEKFGLPAAL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtggtgctgcgtaagctcacggatgtgacggtcctcgcacaccgactcggcgat
gacagccccgccgacgccttcctggcggaagcccagacctaccggcgggagctgctcgca
cactgctaccggatgaccggctcgctgcacgacgccgaggacctggtgcaggagacgtac
ctgcgggcgtggaagtcctatgagggtttccagggcaggtcctcggtgcgcacatggctg
taccgcatcgccaccaacacctgcctgacgtcgctggagggccgtgcgcgccgtccgctg
ccgtccgggttgggcaccccgagttccgcgccgaccgacgacatcaccgagcaccacgag
gtgccctggctggagccgctgcccgacggtgacgatccggccgacccgtcggagatcgtc
ggcaaccgggaatccgtgcggctggcgttcgtcgccgccctgcagcacctgtccccgcgg
caacgcgcggtgctggtgatgcgggaggtcctgcagtggaaggcgtccgaggtgggcgat
gcgatcggggcttccacggccgccgtcaacagcctgctgcagcgggcccgggcccagctc
gagaccgtcgcccccagcgcggacgacaggatcgaaccgccggagtccccgcaggctcag
gccacgctggacaagtacatggcggcgttcgaggcctacgacatcgacaagctggtcgag
ttgttcaccgaagaggccatctgggagatgccgccgttcgacacctggtaccgcggcccg
caggccatcggcgatctgtcgcgccacaagtgcccggccgagaagccgggcgacatgcgc
ttcatccggaccaccgcgaacggtcagcccgccgcggcgatgtacatgcgcaaccccgac
accggtcggcacgaggccttccagctgcacgtcctggacatcaccgcgggcggcatctcc
catgtcgtggcgttcatgggcgagggtctgttcgagaagttcgggctgcccgcagcgctc
tag
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