Meleagris gallopavo (turkey): 100542481
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Entry
100542481 CDS
T01523
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04115
p53 signaling pathway
mgp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100542481 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
100542481 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mgp04121
]
100542481 (COP1)
Enzymes [BR:
mgp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100542481 (COP1)
Ubiquitin system [BR:
mgp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100542481 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100542481 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
zf-C3HC4_2
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_DCAF4
zf-C3HC4
Beta-prop_WDR90_POC16_2nd
zf-RING_2
zf-RING_5
WD40_RFWD3
zf-RING_UBOX
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
zf-rbx1
zf-C3HC4_3
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-C3HC4_4
zf-RING_4
WDR90_beta-prop_4th
zf_C2H2_10
RING_XB3-XBAT31
zf-RING_10
Prok-RING_4
TRAF3_RING
DZR
Motif
Other DBs
NCBI-GeneID:
100542481
NCBI-ProteinID:
XP_010714111
Ensembl:
ENSMGAG00000002304
UniProt:
A0A803Y2Z2
LinkDB
All DBs
Position
10:complement(13263209..13384734)
Genome browser
AA seq
590 aa
AA seq
DB search
MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRSE
EKRFKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL
QILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPS
HSSIIDSTEYSQPPGFSGSSQAKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRVSD
DSRTTSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV
TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF
TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCV
KFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQ
LKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFD
TVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagaagcctacatgacaaaatgtggacacagcttctgctacaaatgtattcac
cagagcttggaagataacaacagatgtcccaaatgtaattatgttgtggacaacatagat
catctttatcccaatttcttagtcaatgaacttattcttaaacaaaaacagagatctgag
gagaaaagattcaaactggaccattcagtgagtagcaccaatggccacaggtggcagata
attcaagatttgttgggaactgatcaagacaatcttgacttggctaatgtcaacctgatg
ctggagctgctggtgcaaaagaagaagcaattagaagcagagtcccatgctgcccagctg
cagattcttatggaatttctcaaagttgccagaagaaacaaacgagagcaactggagcag
atccagaaggagctaagtgttctggaagaagatattaaacgagtagaggaaatgagtggc
ttgtactccccagtcagtgaggacagtacggtgccgcagtttgaagctccctcaccttca
cacagtagtattattgactccacggagtacagccagcctccaggcttcagtggcagttct
caggccaaaaagcagccatggtataacagcacgctagcctcgcgacggaagcggctcaca
gctcactttgaggacctagagcagtgctatttttctacaaggatgacacgtgtctcagat
gacagcagaaccacaagccagctggatgagtttcaggagtgtctgtccaagttcacgcgc
tacaattctgtccgacccctggcaacgctgtcctacgctagtgacctctacaatggctcc
agcatagtctccagtattgagtttgaccgggactgtgactactttgccatcgctggggtg
acaaagaagattaaagtctatgaatatggtacagtcattcaggatgcagtggatattcac
taccctgagaatgaaatgacctgtaattccaaaatcagctgtatcagctggagtagttac
cacaagaacctgctagccagcagcgactatgaaggcacagtcatcctgtgggatgggttc
acgggacaaagatccaaggtctaccaggagcatgagaaaaggtgctggagtgttgacttc
aacttgatggacccaaagctattagcttcaggctctgatgatgcaaaagtgaagctgtgg
tctaccaatttggacaactccgtagcaagcatcgaagccaaggcaaacgtgtgttgtgtc
aaattcagcccctcttctagataccacctagcctttggctgtgcagatcactgtgtccac
tattatgatcttcgcaacactaagcaacccatcatggtgttcaaagggcatcgcaaagca
gtctcctatgcaaaatttgtgagcggggaggaaatagtctctgcgtcaacagacagtcag
ctgaagctgtggaacgtagggaaacctcactgcttgcgttccttcaagggccacatcaat
gagaagaattttgtagggctggcatccaacggagactacattgcctgtggaagtgaaaat
aattctctttacctatactataaaggcctctcaaagacactcctaacattcaagtttgat
acggtcaagagcgtcctggacaaggaccggaaggaagatgacacaaatgaatttgtgagt
gctgtctgctggagggcactaccagatggggagtccaacgtgctaattgctgctaacagt
cagggtacaattaaggtactggagctggtatga
DBGET
integrated database retrieval system
