Micromonospora halotolerans: RMN56_14020
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Entry
RMN56_14020 CDS
T09415
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mhaw
Micromonospora halotolerans
Pathway
mhaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RMN56_14020 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhaw03019
]
RMN56_14020 (groL)
03110 Chaperones and folding catalysts [BR:
mhaw03110
]
RMN56_14020 (groL)
03029 Mitochondrial biogenesis [BR:
mhaw03029
]
RMN56_14020 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mhaw04147
]
RMN56_14020 (groL)
Enzymes [BR:
mhaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RMN56_14020 (groL)
Messenger RNA biogenesis [BR:
mhaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RMN56_14020 (groL)
Chaperones and folding catalysts [BR:
mhaw03110
]
Heat shock proteins
HSP60 / Chaperonin
RMN56_14020 (groL)
Mitochondrial biogenesis [BR:
mhaw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RMN56_14020 (groL)
Exosome [BR:
mhaw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RMN56_14020 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RMN56_14020 (groL)
Exosomal proteins of breast cancer cells
RMN56_14020 (groL)
Exosomal proteins of colorectal cancer cells
RMN56_14020 (groL)
Exosomal proteins of bladder cancer cells
RMN56_14020 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
DUF5021
MukE
Motif
Other DBs
NCBI-ProteinID:
WNM42375
LinkDB
All DBs
Position
2944220..2945842
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AA seq
540 aa
AA seq
DB search
MAKMIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
AAVANVSEELLKLAKDVETKEQIASTASISAADPSVGEIIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFMTDPERMEAVFDDPYLLIVNSKISSVKDLLPILEKVMQ
SGKPLLIISEDIEGEALATLVVNKVRGTFKSVAVKAPGFGDRRKAMLADIAILTGGQVIS
EEVGLKLDAVSLDMLGRARKVVVTKDETTIVDGAGDADQIQGRVNQIRAEIEKSDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALVQA
GKTAFDKLDLAGDEATGAQIVKIALDAPLRQIAVNAGLEGGVVVERVRNLDPGHGLNAAT
GEYVDLLAAGIIDPAKVTRSALQNAASIAALFLTTEAVVADKPEKTPAAPAGPGGGEMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatgatcgcgttcgacgaagaggcgcgccgcggcctcgagcggggcatgaac
cagctcgccgacgccgtgaaggtgacgctcggccccaagggccgcaacgtcgtgctcgag
aagaagtggggtgcccccaccatcaccaacgatggtgtgagcatcgccaaggagatcgag
ctcgaggacccctacgagaagatcggcgccgagctggtcaaggaggtcgcgaagaagacc
gacgacgtggccggtgacggcacgacgacggcgaccgtcctggcccaggccctggtccgt
gagggtctgcgcaacgtggccgccggcgccaacccgatggccctgaagcggggcatcgag
gccgccgtggccaacgtctcggaggagctgctgaagctcgccaaggacgtggagaccaag
gagcagatcgcctccaccgcctccatctccgccgctgaccccagcgtcggtgagatcatc
gccgaggcgatggacaaggtgggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcggcctcgagctcgagctcaccgagggcatgcgcttcgacaagggctacatctccgcc
tacttcatgaccgacccggagcgtatggaggccgtcttcgacgacccgtacctcctgatc
gtcaacagcaagatctcgtcggtgaaggacctgctcccgatcctggagaaggtcatgcag
tcgggcaagccgctgctgatcatctccgaggacatcgagggcgaggccctggcgaccctg
gtggtcaacaaggtccgcggcaccttcaagtcggtcgccgtcaaggcgccgggcttcggt
gaccgccgcaaggccatgctggccgacatcgccatcctcaccggtggtcaggtcatcagc
gaggaggtcggcctcaagctcgacgccgtcagcctcgacatgctgggccgcgcccgcaag
gtcgtggtgaccaaggacgagaccaccatcgtcgacggtgccggcgacgccgaccagatc
cagggccgggtcaaccagatccgggccgagatcgagaagagcgactccgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggcggtgttgcggtgatcaaggtcggc
gcggccaccgaggtcgagctgaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggccgccgtcgaggagggcatcgtcccgggtggtggcgtcgcgctggtgcaggcc
ggcaagaccgccttcgacaagctggacctggccggcgacgaggcgaccggcgcgcagatc
gtcaagatcgcgctggacgccccgctgcggcagatcgccgtcaacgccggcctcgagggt
ggcgtcgtcgtcgagcgggtccgcaacctcgacccgggtcacggcctcaacgccgcgacc
ggcgagtacgtggacctgctggccgcgggcatcatcgacccggccaaggtgacgcgttcc
gcgctgcagaacgccgcctcgatcgccgcgctgttcctcaccaccgaggccgtcgtggcg
gacaagccggagaagaccccggccgccccggctggcccgggtggcggggagatggacttc
tga
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