Marinobacter nauticus ATCC 49840: MARHY2599
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Entry
MARHY2599 CDS
T02083
Symbol
rpoN
Name
(GenBank) RNA polymerase, sigma 54 (sigma N) factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc02020
Two-component system
mhc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MARHY2599 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MARHY2599 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhc03021
]
MARHY2599 (rpoN)
Transcription machinery [BR:
mhc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MARHY2599 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
CCDC14
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CCG96063
UniProt:
H8WAR0
LinkDB
All DBs
Position
2661823..2663358
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AA seq
511 aa
AA seq
DB search
MVMKASLQLKLGQSLTMTPQLQQAIRLLQLSTLDLQQEIQQALESNPMLETSEDDEHAEG
DEREEHEHSDASSSEANQDDSHQDASPDWDETENGPDWSSENDIPDNIPDDLPVDTAWDD
IYQSAPAPASKGEDEHESDFETRNSPTETLQDHLEWQLNLTPLSERDQAIAHALLDAVDE
RGYLTSDIEDIHAGLLDETEEDPLELDEVEAVLHRLQHFDPPGVFARDLQECLLIQLNQL
PPDTPWLRQARLVVTQFLHLLGNRDYAQLLRRSRLKEDQLKQVLALITSLNPRPGDVVDR
AEPDYVIPDVIVRKHEGRWRVELNPEIAPRIRVNASYASLIRRADSSADNTYLRDQLQEA
KWFIKSLQSRNETLLKVATRIVEHQQGFLDQGEEAMKPLILSDIAQAVEMHESTISRVTT
QKYMHTPRGIFELKYFFSSHVSTAEGGECSSTAIRAMIKKLIAEETPKKPLSDSKIAAML
GEQGINVARRTVAKYREAMHIPPSNERKRLV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggttatgaaagcctcattacagcttaagctgggccagagtctgaccatgacgccccag
ctgcagcaggccatacgcctgctacagctttctaccctcgatctccagcaggaaatccag
caggcgctggaatccaaccccatgctggaaacctcagaggacgatgagcacgcggaaggc
gacgagcgcgaagagcacgagcacagtgacgcttccagctctgaggccaaccaggacgac
agccaccaggacgcgagcccggactgggacgaaaccgagaacggcccggactggtcgtcc
gagaacgatattccggacaacattcccgatgatctgccagtggataccgcctgggacgac
atctaccagtctgccccggctccggccagcaaaggcgaagacgaacacgaatcggatttc
gaaacccggaactcgcctaccgaaaccctgcaggatcacctcgagtggcagctgaacctg
acgcctctgagcgagcgggatcaggccattgcccacgcgctgctggatgctgtggatgag
cgcggctacctgacgtctgacattgaggacattcacgcaggcctgctggacgaaaccgaa
gaagacccgttagaactggacgaagtggaagcggtactccaccgcctgcaacacttcgac
ccgcccggcgtgttcgctcgtgatctccaggaatgcctccttattcagctcaatcagctg
ccaccggataccccctggctgcgccaggcgagactggtggttacccagttcctgcatctg
cttggcaaccgggactacgcgcagctgttacgccgcagccggctcaaggaagaccagctg
aaacaggtactggccctgatcaccagcctgaacccgcgccctggcgatgtcgtggaccgg
gccgaaccagattacgttatcccggacgttatcgtacgcaaacacgaaggccgatggcgg
gttgaactcaacccggaaatcgctccgcgtatccgggtgaatgccagctacgcgtcactg
atccgccgggctgacagcagtgccgataacacctacctgcgcgaccagctgcaagaagcg
aaatggtttatcaagagcctgcaaagccggaatgaaaccctgctgaaagtggccacccgc
atcgttgaacaccagcaagggttcctggatcagggcgaagaagccatgaagcctctgatc
ctgtctgacattgcccaggcggtggaaatgcacgagtccacgatttcccgggttaccacc
cagaagtacatgcacacgccccgcggtattttcgagctgaagtactttttctccagccac
gtcagcaccgccgagggcggcgaatgctcgtctacagccatccgggcgatgatcaagaag
ctgattgccgaggaaaccccgaaaaagccattgagcgatagcaaaattgcagccatgcta
ggggaacagggaatcaacgtggcgcggcgtaccgtcgccaaataccgggaggccatgcat
attcctccctcgaacgaacgaaaacgcctggtttaa
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