Mycolicibacter heraklionensis: K3U94_03605
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Entry
K3U94_03605 CDS
T07612
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mher
Mycolicibacter heraklionensis
Pathway
mher03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K3U94_03605 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mher03400
]
K3U94_03605 (recB)
Enzymes [BR:
mher01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K3U94_03605 (recB)
DNA repair and recombination proteins [BR:
mher03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K3U94_03605 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_30
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
QZA09934
UniProt:
A0A9X7ZHB8
LinkDB
All DBs
Position
complement(759768..763061)
Genome browser
AA seq
1097 aa
AA seq
DB search
MERFDLLGPLPARATTTVLEASAGTGKTFTLAGLVTRYLAEGRATLDEMLLITFSRAATR
ELRDRVRRQLVETLAALDGASTQEPNDLVAHLCSGSAEDREVRRRRLRDALAGFDAATIA
TTHQFCHLVLKSLGIAGDTSAGVELVESLDDLVIQVVDDLYLAKFGTQRDEVALSYADAL
KLARVVVSDPYAQLRPQDPEPGSVAEVRLRFIDAVCTELELRKRRLGVLGYDDLLRRLAA
ALEPADSPARERMRQRWPIVMVDEFQDTDPIQWQVIERGFVGHSAVVLIGDPKQAIYGFR
GGDIYTYLQAARTAGQQRTLAVNWRSDSALVDALQTVMGGAALGDPQIVVHDVRAAVGGS
RLVGAPSTAPFRLRVVGRAAFGVSSDRVVPMPKLRRHIPDDLAADVAALWASGATFDGRP
ITPGDVAVIVENSKDAAACQEALLRAGIPAVFTGDADVFSSAAAADWLCLLEAFEATHRG
GLVRAAAATVFFGYTAAALADGGDALTDKVASTLRDWADELRLHGPAAVFEAAQLAGLKR
RLLGEYGGERTMTDLAHVAQLLHEAAHRDRLGLPALRDWLRRQCTEGNGGGQHNRRLDSD
AAAVQILTVWGAKGLQFPIVYLPFAFNRHMFDEAIPLYHDGGVRCRHVGGPDSFDHTDVQ
RLSLAEAARNDIRLAYVALTRAQSQVVAWWAASYDEPNGGLSRLLRGRCRGEAPVPDRCE
PKPTDDEALSCFREWEAAGGLVIEDSVIAPLAPVVPAQPPDGLEARHFHRHIDTGWRRTS
YSGLIRHASEVTEGGASGVHSEPELSARDDEADDVPVAAAPPPVGADLISPMAELPAGAA
FGSLVHAVLETADPFAADLAAELEAHVRQHAAWWSVDAEPAALAAALVPMHDTPLGPLAD
GLTLREIGTRDRLRELDFEIPLAGGDVRGVAPDVRLAEVGLLLREHLPADDPFAPYADRL
ATEALGGQPLRGYLSGSIDVVLRVPEQRFLVVDYKTNRLGDTAADYGFDRLTAAMLHSDY
PLQALLYTAVLHRFLRWRLPGYDPEQHLGGVLYLFVRGMCGPDTPALGGHRAGVFDWRPP
TALVVALSDLLHARRAA
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcttcgacctgctgggcccactgcccgcccgcgccaccaccaccgtcctggag
gccagcgccggcaccggtaagacattcaccttggccggtctggtgacccgctatctggcc
gaggggcgcgccacgctggacgagatgctgctgatcacgttcagccgggcggccaccagg
gagctgcgggaccgggtgcgtcgtcagctggtggagacattggccgccctcgacggcgcc
agcacgcaggaacccaatgatcttgtcgcgcatctgtgcagcggcagtgcggaggatcgc
gaggtgcgccgccggcggctgcgtgacgcgctggccggcttcgacgccgcgaccatcgcc
accacccaccagttctgtcatctggtgctgaaatcactgggcatcgccggtgacaccagc
gcgggcgtcgagttggtggaaagccttgacgacctggtgatccaggtcgtggatgacctg
tacctcgcgaagttcgggacgcagcgcgacgaggtggcgctcagttacgccgacgcgctg
aaactcgcgcgggtggtggtctccgacccgtatgcccaactgcgcccgcaggatcccgaa
ccgggttcggtggccgaggtgcggctgcgattcatcgacgcggtgtgcacggagttggag
ttgcgcaagcgccggctcggcgtattggggtacgacgacttgctgcgccggctcgccgcc
gcactggagccggcggattccccggcgcgggaacggatgcggcagcgctggccgatcgtg
atggtcgatgagttccaggacaccgaccccatccagtggcaggtgatcgaacgcggcttc
gtcgggcattcggcggtggtgctgatcggcgaccccaagcaggcgatctacgggttccgc
ggcggcgacatctacacctacctgcaggcggcacgcaccgccgggcagcagcgcaccctg
gcggtgaactggcgcagcgactcagccctggtcgatgcgctgcagacggtgatgggcggt
gcggcgctgggtgatccgcagatcgtggtgcacgatgtccgggccgcggtcggcgggtct
cggctggtcggtgcgcccagcaccgccccgttccggctgcgggtggtcggccgcgcggcg
ttcggcgtcagctcagaccgcgttgtcccgatgcccaagctgcgccgccacattcccgat
gatctggccgccgacgtcgccgccttgtgggccagcggcgcgaccttcgacggcaggccg
atcacccccggtgacgtggcggtgatcgtcgagaacagcaaggacgcggccgcctgccag
gaggccttgctgcgggccgggattcccgcggtgttcaccggcgatgcggacgtgttctcc
tcggctgcggccgccgactggctgtgtctgctggaggcgttcgaggcgacccaccgcggc
gggttggtgcgggccgccgcggcgacggtattcttcggctataccgccgccgcactggcc
gacggcggtgacgcgttgaccgacaaggtggcgtcgacgttgcgggactgggcggatgag
ctgcggctgcacgggccggcggcggtgttcgaggcggcgcagttggccggcctgaagcgc
cgactgctcggcgagtacggcggcgaacgcaccatgaccgatctggcgcatgtggctcag
ctgctgcatgaggccgcgcaccgcgaccggctgggcctgccggcgttacgggattggttg
cgccgtcaatgcaccgaaggaaacggcggcgggcagcacaatcgtcggctggactccgac
gccgctgccgtgcagatcctgacggtgtggggcgccaagggtttgcagttcccgatcgtg
tacctgccgttcgcgttcaaccggcacatgttcgacgaggccatcccgctctatcacgac
ggcggtgtccgctgccggcacgtcggcggcccggacagcttcgaccacaccgatgtgcaa
cggctgagcctggccgaggctgcccgcaacgacattcggctcgcctatgtggcattgacc
cgggcgcagtcgcaggtggtggcgtggtgggcggcgtcgtacgacgagcccaacggcggc
ctgtcccggctgctgcggggccgatgccgcggcgaggcaccggtgccggatcgctgcgag
cccaaacccaccgatgacgaagcactgtcctgtttccgggagtgggaggccgccggcggc
ctggtcatcgaggactcggtgatcgccccgttggcaccggtcgtcccggcacagcctccg
gatggcttggaagcgcggcatttccaccgccacatcgacaccgggtggcgtcgcacgtcg
tattcggggctgatccggcatgccagtgaggtcaccgaaggcggggcgtctggggtgcac
agtgaaccggagttgagcgcccgcgacgacgaggccgacgacgtgcccgtagcggcggcg
ccgccgccggtcggggcggatctgatctcgccgatggccgagctgcccgccggggcggcg
ttcggctcgctggtgcacgccgtgctggagaccgccgatccgttcgccgccgacttggcc
gccgagctggaagcccacgtgcgtcaacacgccgcctggtggtcggtggacgccgagccg
gccgcgctggcggcggcgctggtgcccatgcacgacaccccgctggggccgctggccgac
gggctgacactgcgcgagatcggcacccgggaccggttgcgggagctggattttgagatt
cccctggccggtggagatgttcgcggcgtagcgccggacgtgcggctggcggaggtggga
ttgctgctgcgcgagcacctgcccgcggacgacccgttcgccccgtatgccgaccggctg
gccaccgaggccctgggcggccagccgctgcgcggatatctgtccgggtcgatcgatgtg
gtgctgcgggtgcccgagcagcgcttcctggtggtcgactacaagaccaaccggctcggc
gacaccgccgccgactacggcttcgaccggctcaccgccgccatgctgcattcggactac
ccgctacaggcgctgctgtataccgcggtgctgcaccgcttcctgcggtggcggctgccc
ggttacgaccccgagcagcacttgggcggggtgttgtatctgttcgtgcgcggaatgtgc
ggaccggacaccccggcgctcggcgggcaccgtgccggggtgttcgactggcggccgccg
accgcactggtggtggcgttgtcggatctgttgcacgcgaggcgggcggcatga
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