Methylocystis heyeri: H2LOC_006165
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Entry
H2LOC_006165 CDS
T06290
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mhey
Methylocystis heyeri
Pathway
mhey03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H2LOC_006165 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhey03400
]
H2LOC_006165 (xth)
Enzymes [BR:
mhey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
H2LOC_006165 (xth)
DNA repair and recombination proteins [BR:
mhey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H2LOC_006165 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QGM45313
UniProt:
A0A6B8KFP4
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All DBs
Position
1377751..1378551
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AA seq
266 aa
AA seq
DB search
MKITTWNINSVRLRMPLVVHFLKTNAPDVICLQETKCRDAEFPSSDLRALGYEHLAVNGQ
KGYHGVAIASKLPVRLLDKQDFCDAGHARHVAVEIDAGGAPLSLHNFYVPAGGDEPDETV
NPKFAHKLGFLDEMTEWIKRERIAAGRSVLVGDLNIAPLEHDVWSHKALLKVVSHTPIEV
EKLNKMFEAGEWIDSMRRFVPPQEKLYTWWSYRASDWAASDRGRRLDHVLVSQALGGALA
GLQVAREARGWERPSDHVPVTVELSL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaccacctggaacataaactccgtgcggctgcgcatgccgctggtcgtccat
ttcctgaaaaccaacgcgcctgacgtcatttgccttcaggagaccaagtgccgggacgcc
gaattcccttcgagcgatctccgggcgctgggctatgagcatctcgcggtgaatggacag
aagggctatcacggcgtcgccatcgcctcgaagcttcccgtccgcctgctcgacaagcag
gatttttgcgacgccggacacgcacgccacgttgcggtggagatcgacgcgggcggcgcc
ccgctttccctgcataatttctatgttccggcgggcggcgacgagcccgacgagacggta
aatcccaaattcgcgcacaagctcggttttctcgacgagatgaccgaatggatcaaacgc
gagcgcatcgccgccggacgttcggttctcgtcggcgacctcaacatcgccccgctggag
cacgacgtctggagccacaaggccctgctgaaggtggtgagccacacccccatcgaggtc
gagaagctcaacaagatgttcgaggcgggcgaatggatcgactcgatgcgccgcttcgtg
ccgccgcaggaaaagctctacacctggtggagctatcgcgcgtcggactgggcggcctcc
gaccgcggccgaaggctggaccacgttctcgtgagccaggcgctcggcggcgcgctggcg
ggcctgcaagtggcgcgcgaagccaggggctgggaacgcccgtccgaccatgtgccggtg
accgtcgaactcagcctgtag
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