Metamycoplasma hyosynoviae: MHSN_01625
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Entry
MHSN_01625 CDS
T05673
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mhyv
Metamycoplasma hyosynoviae
Pathway
mhyv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhyv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MHSN_01625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhyv03021
]
MHSN_01625
03400 DNA repair and recombination proteins [BR:
mhyv03400
]
MHSN_01625
Enzymes [BR:
mhyv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MHSN_01625
Transcription machinery [BR:
mhyv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MHSN_01625
DNA repair and recombination proteins [BR:
mhyv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MHSN_01625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ASI53893
UniProt:
A0A4P1QG45
LinkDB
All DBs
Position
424975..428607
Genome browser
AA seq
1210 aa
AA seq
DB search
MAKEKEYVVRKFGPITERRDYSISQKKFETPDFLEMQRQSIEKFLKESIEQELRNIYPIE
ARDKVRIDYIHNSAVFEVPKKTEFECIKEAKQKGSSYVGKLKVTLRETILSTGETDDAEI
ILAEIPILTYGGSFIINGSEKVIVSQLIRSTGAYFGVGVRNKQANDLFNKVEIIPQIGSW
VEIYHKVTSTNLDTIKIMIDKNKSFYLTIFLKALGFTKRGIYEIFGKVPELRETFRRDKI
YSENVEEIIREAQEAIYRLIRKGDRMSADSVRNLIPLTLFNEKRYNLTETGRFTLNRKLS
VIERILNTYLAQDIYSKSGKLLYEKGIFITLDIAKKIHEELKLGIIPMWRLPDIDESVYG
NQLEVEGNEKLIDRLYVPLIKVYPTENDMLNNNLVPVIGNDPTSDENFLTVPDIIATISY
YFNLLQNVGFDDDPDSLINKRIVTIGELLQNQFRVGLIKLEKNTKERIATKEIDKITPKN
VTNNKPIFNQFKSFFNTSKLSQFMDQCNPLAEISNKRRITSLGPRGLNRDTAQFEVRDVH
PTHYGRICPIETPEGPNIGLILNLASFAKIDKYGFIQTPYFKVKDRKIDFSEPKYLTAIE
EMGAIIAQSTVRIKNNMIIDEYAMARKDSEFIEVEASKVDYIGVSNRQMTSIAASAIPFL
ENDDANRALMGSNMQRQAVPIIKPEAPLVATGVEADIARYSSTNLRSTIDGTVTYIDADK
IEITPDDFAETSTKSTKKSKRPEVFYLRTFERSNQGTLIHQIPLVKLGQKIQKGDLLVDG
PSMKDGELALGKNVLVGFSTWHGYNYEDAVILSEKLVKDDVYTSIHIEEQTIQFRHSKAG
EDYLTADIPNASNFSKRFLNDQGIVRVGSEVIAGDILVGRTSPKGEENPTPEEKLMAAIF
SQKSSQRKDTSLKVKHGHNGTVVAVEVLSREFGDQLEDGIEKIVKVSIAQKRKIQVGDKM
AGRHGNKGVVSVVLPVEDMPYLEDGTPLDIVLNPQGVPSRMNIGQVLELHLGLAAKKLGV
KFVTPVFDGITHNQIKDILQEAKIDPSGKSVVYNGQTGEKLDAPISVGIMYYLKLYHMVD
DKMHSRSVGPYSLITQQPLGGKSQNGGQRFGEMETWAIESYGASNVLQELLTYKSDNIMG
RNQLYNALSKGTKLPKPGMPESFNVLAYELRGLGIKLEAHEKSGTGDDADDSEVNRIDTK
YYQEIEGGAE
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaaaagaatatgtagtaagaaaatttggtccgataaccgaaagacgtgat
tattcaatttcacaaaagaaatttgaaacacctgactttcttgaaatgcaaagacaatca
attgaaaagtttctaaaagaaagtattgaacaagaacttagaaatatttacccaattgaa
gctcgtgacaaagttagaattgactacattcacaatagtgcagtttttgaagttcctaaa
aaaactgaatttgaatgtatcaaagaagcaaaacaaaaaggttcaagctatgttggaaaa
ttaaaagtaacattgcgtgaaaccatattaagtacaggagaaactgatgatgctgaaatc
attttagcagaaattcctatcctgacttatggtggttctttcatcatcaatggatctgaa
aaagttattgtttcacaacttattagatcaactggcgcttatttcggagtaggtgttaga
aataaacaagcaaacgaccttttcaacaaagttgagatcattccacaaattggttcatga
gttgaaatttaccacaaagtaacatcaactaaccttgatactatcaagattatgattgac
aaaaataaatcattttatttaaccatattcttgaaagcattaggctttaccaaaagagga
atttatgaaatttttggtaaagttcctgaactacgcgaaactttcagaagagataaaatt
tacagcgaaaacgttgaagaaatcatccgtgaagcacaagaagccatctatcgtttaatc
agaaaaggcgatagaatgtcagcagatagtgttcgtaatttaattccgctaactttattt
aacgaaaaacgttacaacctaactgaaaccggaagatttactttaaatcgaaaattaagt
gttatcgaaagaattttaaacacatatttagcacaagatatttactcaaaatcaggtaaa
ctactttatgaaaaaggcatattcataacacttgatatcgctaaaaaaattcatgaagaa
ttaaaacttggaattattccgatgtgaagacttcctgatattgacgaaagtgtttatggt
aatcaactagaagttgaaggaaatgaaaaattaattgatagattatatgttcctttaatt
aaagtttatcctactgaaaatgatatgttgaacaacaatttggttccagttattggaaat
gaccctacatcagatgaaaactttttaacagttcctgacattattgcaacaatatcatac
tatttcaacttacttcaaaacgtaggttttgatgatgaccctgattcacttatcaacaaa
agaattgtgaccatcggtgaacttttacaaaaccaatttagagttggattaatcaaactc
gaaaagaacaccaaagaaagaattgcaacaaaagaaatagataaaattacacctaaaaat
gtaactaacaataaacctattttcaatcaattcaaatctttctttaatacatcaaaactt
tcacaatttatggatcaatgtaatccattggctgaaatttcaaacaaaagaagaataact
tcgcttggacctcgtggtcttaaccgtgacactgcacaatttgaagtacgtgacgtccat
ccaacgcactatggtagaatttgtcctattgaaactcctgaaggacctaacattggactt
attttaaatttagcttcatttgcaaaaattgataaatatggtttcattcaaaccccttac
tttaaagttaaagacagaaaaattgatttttctgaacctaaatatttaactgctattgaa
gaaatgggtgctattattgctcaatctactgtcagaattaaaaacaatatgattattgat
gaatatgctatggctagaaaagatagtgaatttattgaagtagaagcttcaaaagttgac
tatattggggtttctaaccgccaaatgacatcgattgctgcatccgctattccatttttg
gaaaatgacgacgctaaccgggcattgatgggatcaaacatgcaacgtcaagcagttcct
atcattaaacctgaagctccattagtagctactggagttgaagctgatattgcaagatat
tcatctactaaccttcgttctacaatagatggaacagtaacatatattgatgctgataaa
attgaaattacacctgatgattttgcagaaacttctacaaaatcaaccaaaaaatcaaaa
agaccagaagtattttatttaagaacatttgagcgttcaaaccaaggtactttaattcat
caaattccgttagttaaacttggacaaaagattcaaaaaggtgatcttctagtagatggt
ccttctatgaaagatggtgaacttgcacttggtaaaaacgtattagtaggtttttcaacc
tgacatggatacaactatgaagatgctgttattctttcagaaaaacttgttaaagatgat
gtttatacttcaattcatattgaagaacaaaccattcaattcagacattcaaaggcagga
gaagattatttaactgctgatattcctaacgcatcaaacttttcaaaaagatttttgaat
gaccaaggaattgttagagttggatctgaagttatagcaggagatattttagttggaaga
actagccctaaaggtgaagaaaacccaacacctgaagaaaaactaatggccgctatattt
agtcaaaaatcatcgcaaagaaaagatacttcacttaaagttaaacatggacacaatggt
actgttgttgcagttgaagttctttcacgtgaatttggtgaccaactagaagatggaatt
gaaaaaatagtaaaagtttctattgctcaaaaacgtaaaatccaagttggagacaaaatg
gcaggacggcacggaaacaaaggtgttgtttcagtagttctaccagtagaagatatgcct
tatttagaagatggtactccacttgacattgttttaaacccacaaggtgttccttctcgg
atgaacattggtcaagtcttggaattacacttaggtcttgctgctaaaaaattaggtgta
aaatttgttactcctgtatttgatggaattacccacaaccaaattaaagacattttgcaa
gaagcaaaaattgatccaagtggtaaatctgtagtatacaacggtcaaactggtgaaaaa
ttagatgctccaatttctgttggtattatgtactatctaaaactttaccacatggttgat
gacaaaatgcactcacgttcagtcggaccatattctcttatcactcaacaaccacttgga
ggtaaaagccaaaacggtggtcaaagatttggtgaaatggaaacttgagctattgaatca
tatggtgcttcaaatgtattacaagaacttctaacttataaatcagacaacattatgggt
agaaatcaactatataatgcactttcaaaaggaacaaaactaccaaaaccaggtatgccc
gaatcattcaacgttttagcttatgaacttcgtggattaggtattaaattagaagctcat
gaaaaatctggaactggtgatgacgctgatgatagtgaagtaaatagaattgatactaaa
tactaccaagaaattgaaggaggagcagaataa
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