Mycobacterium intracellulare ATCC 13950: OCU_08020
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Entry
OCU_08020 CDS
T02158
Name
(GenBank) TetR family transcriptional regulator
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
mia
Mycobacterium intracellulare ATCC 13950
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mia03000
]
OCU_08020
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
mia01504
]
OCU_08020
Transcription factors [BR:
mia03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
OCU_08020
Antimicrobial resistance genes [BR:
mia01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
OCU_08020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
HTH_23
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
AFC42022
UniProt:
H8IRU6
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Position
788110..788754
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AA seq
214 aa
AA seq
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MYISVVTAARRGRPTQAEVKKLQQRLRKAAIATFIKHGYDGASMDAIAKAAGTTRRTLYA
RYPNKRSVFLDVIPWALTRKTEHEATHEVDDNDLRAALVAVGRAGLQRAIDPDMVRLKQI
AMTESARFPEFAVSAHSMTWSPRHRQVMDLLARHQRAGAIEVDDLELSAGHFIALVEHLP
ARLADSGIYRPPEEEERHLQHAVDFFLRGVVRRD
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtatatttccgtggtcaccgcagcccggcgaggacgcccgacgcaggccgaagtcaag
aagctgcaacaaaggctgcgcaaggctgcgatcgcgacattcatcaagcacggctacgac
ggtgccagcatggatgcgatcgccaaagcggccggcaccacccgacgcactctgtacgcg
cgctatcccaacaagcgttcggtctttctcgacgtcattccgtgggcgctcacccgcaaa
accgagcatgaagccacgcacgaagtggatgacaatgacctgcgagccgcccttgttgcg
gtcggtcgcgccggtctgcagcgcgcaatcgatccggacatggtgcgcctgaagcagatc
gccatgaccgaatcggcacggtttcccgaattcgccgtgagcgcgcattccatgacctgg
tccccgcgccaccggcaggtgatggacctgcttgctcgccaccagcgggccggagcgatc
gaggtcgatgatctcgagttgtccgccggccacttcatcgcgttggtcgagcatctaccc
gcgcggctggcggattccgggatctaccgccctcccgaggaggaggaacgccacttgcag
cacgccgtcgactttttcctgcgcggcgttgtgcgccgcgactga
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